RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PCGF2P35227 344 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ETV5P41161 510 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HSPA13P48723 471 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP4F2P78329 520 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PRAMEP78395 509 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ENPEPQ07075 957 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 GPM6BQ13491 265 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TNFAIP1Q13829 316 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 IDI1Q13907 227 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DMC1Q14565 340 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SF3B4Q15427 424 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MEP1BQ16820 701 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 GPAT3Q53EU6 434 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC36A4Q6YBV0 504 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TMCO2Q7Z6W1 182 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 VASH2Q86V25 355 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CDR2LQ86X02 465 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RFX6Q8HWS3 928 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 GSPT2Q8IYD1 628 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 EIF1ADQ8N9N8 165 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 OR6S1Q8NH40 331 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RNASE8Q8TDE3 154 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RASSF5Q8WWW0 418 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 C19orf60Q96EN9 201 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MSANTD3Q96H12 275 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PBKQ96KB5 322 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 LINC00615Q96LM1 132 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 BIRC8Q96P09 236 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 WDFY2Q96P53 400 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CITED1Q99966 193 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PSD2Q9BQI7 771 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 FRMD8Q9BZ67 464 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TRIM15Q9C019 465 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNN2Q9H2S1 579 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 C10orf88Q9H8K7 445 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 USP29Q9HBJ7 922 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TMBIM4Q9HC24 238 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PAQR5Q9NXK6 330 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 STMN3Q9NZ72 180 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 THEGQ9P2T0 379 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 IL20RAQ9UHF4 553 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DLEC1Q9Y238 1755 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 LOC100653049A0A140TA62 436 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC22A31A6NKX4 558 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 H7C0C1 242 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ATP2A1O14983 1001 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SCO2O43819 266 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT34O76011 436 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SERPINA3P01011 423 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ADRA1DP25100 572 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PTPN6P29350 595 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RCVRNP35243 200 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MTNR1BP49286 362 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DGKEP52429 567 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PEX3P56589 373 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HERVK_113P62684 666 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ERVK-24P63145 666 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 AGBL2Q5U5Z8 902 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MOXD1Q6UVY6 613 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DCDC5Q6ZRR9 648 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MIER3Q7Z3K6 550 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CCDC28AQ8IWP9 274 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DDIASQ8IXT1 998 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM192Q8IY95 271 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF679Q8IYX0 411 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MMGT1Q8N4V1 131 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CCNYL1Q8N7R7 359 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RTL3Q8N8U3 475 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DNAAF3Q8N9W5 541 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CLHC1Q8NHS4 586 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SCFD2Q8WU76 684 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PMEPA1Q969W9 287 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RRNAD1Q96FB5 475 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SAMD8Q96LT4 415 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF184Q99676 751 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 NAA11Q9BSU3 229 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CHODLQ9H9P2 273 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 UCK1Q9HA47 277 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM212BQ9NTI7 297 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HCFC1R1Q9NWW0 138 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TRNAU1APQ9NX07 287 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ARHGAP20Q9P2F6 1191 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DNAJB11Q9UBS4 358 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PLAGL2Q9UPG8 496 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CAPN6Q9Y6Q1 641 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SPACA6W5XKT8 324 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MYH11P35749 1972 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PNMA6EA0A0J9YXQ4 647 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 TYW5A2RUC4 315 aaKnown RBP5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SMCO2A6NFE2 343 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 O00370 1275 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SYN3O14994 580 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF862O60290 1169 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 SPAG6O75602 509 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PGLSO95336 258 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 IFNA14P01570 189 aa5.02□□□□□ -1.61
SPTBN1-206ENST00000602898 PROCP04070 461 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms