RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 LPCAT1Q8NF37 534 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 IPMKQ8NFU5 416 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 SPATA22Q8NHS9 363 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 GSDMBQ8TAX9 411 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 CAPS2Q9BXY5 557 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 PCDH12Q9NPG4 1184 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 KCTD5Q9NXV2 234 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 UBP1Q9NZI7 540 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 SENP1Q9P0U3 644 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 DMTF1Q9Y222 760 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 CHKBQ9Y259 395 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.09□□□□□ -0.79
UPF1-213ENST00000601981 PCDHGA5Q9Y5G8 931 aa10.09□□□□□ -0.79
UPF1-213ENST00000601981 A0A0J9YYE9 177 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 A0A1W2PQU0 124 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CAPN8A6NHC0 703 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 SRRM3A6NNA2 597 aaPredicted RBP10.08□□□□□ -0.8
UPF1-213ENST00000601981 PRR5-ARHGAP8B1AHC4 643 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 POC1B-GALNT4F8VUJ3 575 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 PSMD11O00231 422 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 AREL1O15033 823 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 FZD6O60353 706 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 TM7SF2O76062 418 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 TRBC1P01850 177 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 C1QAP02745 245 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 FGF1P05230 155 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ZNF30P17039 623 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 PGAM1P18669 254 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CD27P26842 260 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 VIPR1P32241 457 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 MMP12P39900 470 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 NPY2RP49146 381 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ATP1A2P50993 1020 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 WNT3AP56704 352 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 TAS2R38P59533 333 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CREB5Q02930 508 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 MTM1Q13496 603 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 FRG1Q14331 258 aaKnown RBP10.08□□□□□ -0.8
UPF1-213ENST00000601981 TMED2Q15363 201 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 TMEM52BQ4KMG9 183 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ARMC3Q5W041 872 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ZNF449Q6P9G9 518 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 UNC5AQ6ZN44 842 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 EXOC3L1Q86VI1 746 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CNPY4Q8N129 248 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 MPP5Q8N3R9 675 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CEP76Q8TAP6 659 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 SLC44A1Q8WWI5 657 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 SKA1Q96BD8 255 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 BIRC7Q96CA5 298 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 SCRN2Q96FV2 425 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 OXNAD1Q96HP4 312 aaPredicted RBP10.08□□□□□ -0.8
UPF1-213ENST00000601981 PAFAH2Q99487 392 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 C6orf106Q9H6K1 298 aaPredicted RBP10.08□□□□□ -0.8
UPF1-213ENST00000601981 PLAC1Q9HBJ0 212 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 FAM86C1Q9NVL1 165 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 HACD3Q9P035 362 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.08□□□□□ -0.8
UPF1-213ENST00000601981 NCDNQ9UBB6 729 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 CTNNAL1Q9UBT7 734 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 PPIL1Q9Y3C6 166 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 MAD1L1Q9Y6D9 718 aa10.08□□□□□ -0.8
UPF1-213ENST00000601981 A0A1W2PPC4 97 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 FAM159BA6NKW6 160 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 ANKRD66B4E2M5 251 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 LATO43561 262 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 EPN2O95208 641 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 RETP07949 1114 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 PDHA1P08559 390 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 MGAT1P26572 445 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 AKT2P31751 481 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 MDH1P40925 334 aaKnown RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 MSH2P43246 934 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SESN2P58004 480 aaPredicted RBP10.07□□□□□ -0.8
UPF1-213ENST00000601981 GNGT1P63211 74 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 CDH17Q12864 832 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 NAB1Q13506 487 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 GALNT3Q14435 633 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SPARCL1Q14515 664 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 EFTUD2Q15029 972 aaKnown RBP eCLIP10.07□□□□□ -0.89e-6■■□□□ 13.8
UPF1-213ENST00000601981 TEAD4Q15561 434 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 LPAL2Q16609 132 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SKIDA1Q1XH10 827 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 KBTBD12Q3ZCT8 623 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 LRRC73Q5JTD7 316 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 KDELC1Q6UW63 502 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 KDELC2Q7Z4H8 507 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 TRABD2AQ86V40 505 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 ZSWIM9Q86XI8 627 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 SYT12Q8IV01 421 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 CYP4X1Q8N118 509 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 OR52K1Q8NGK4 314 aa10.07□□□□□ -0.8
UPF1-213ENST00000601981 FAM174AQ8TBP5 190 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms