RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CNDP2Q96KP4 475 aaKnown RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 LRRC61Q9BV99 259 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 TEX101Q9BY14 249 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 FRMD8P1Q9BZ68 369 aaPredicted RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 CLPBQ9H078 707 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 FGF22Q9HCT0 170 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 PHPT1Q9NRX4 125 aaPredicted RBP15.16■□□□□ 0.02
LIG1-219ENST00000600055 PKD2L2Q9NZM6 624 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 FTSJ1Q9UET6 329 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 ZNF148Q9UQR1 794 aa15.16■□□□□ 0.02
LIG1-219ENST00000600055 INPP4BO15327 924 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 AQP9O43315 295 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 KIF5CO60282 957 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 USP12O75317 370 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 ZNF189O75820 626 aaPredicted RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 IFNB1P01574 187 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 HLA-DPA1P20036 260 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 POLD2P49005 469 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 HK3P52790 923 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 DNAJC3Q13217 504 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 CCNG2Q16589 344 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 KCTD19Q17RG1 926 aaPredicted RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 PARP6Q2NL67 630 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 RANBP10Q6VN20 620 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SLCO6A1Q86UG4 719 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 TTC30BQ8N4P2 665 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 PNPLA1Q8N8W4 532 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 GLIS1Q8NBF1 620 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 GPR26Q8NDV2 337 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 OR56A4Q8NGH8 313 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 BLOC1S5Q8TDH9 187 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 BTN2A2Q8WVV5 523 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 RTP4Q96DX8 246 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 CDC6Q99741 560 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SLC13A1Q9BZW2 595 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 FAM83DQ9H4H8 585 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SUDS3Q9H7L9 328 aaPredicted RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 BPIFA1Q9NP55 256 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 TOR4AQ9NXH8 423 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SMARCAL1Q9NZC9 954 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 SPASTQ9UBP0 616 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 MOSPD1Q9UJG1 213 aa15.15■□□□□ 0.02
LIG1-219ENST00000600055 AAR2Q9Y312 384 aaKnown RBP15.15■□□□□ 0.02
LIG1-219ENST00000600055 FADS2P1A8MWK0 482 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 TNFSF14O43557 240 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 BUD23O43709 281 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 RASGRP1O95267 797 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 LDOC1O95751 146 aaPredicted RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 TOP3BO95985 862 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 TNFP01375 233 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 FUCA1P04066 466 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 FGF1P05230 155 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 CEACAM5P06731 702 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 ADRB1P08588 477 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 FTH1P19P0C7X4 201 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 MYF5P13349 255 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 BPIP17213 487 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 TEAD1P28347 426 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 STIP1P31948 543 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 KCNJ1P48048 391 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 DEFB133Q30KQ1 61 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 P3H1Q32P28 736 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 HENMT1Q5T8I9 393 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 KCTD11Q693B1 232 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 DENND5AQ6IQ26 1287 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 DOK6Q6PKX4 331 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 ADAMTSL4Q6UY14 1074 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 NLRP8Q86W28 1048 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 KLHDC8BQ8IXV7 354 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 RAVER1Q8IY67 606 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 RASGEF1CQ8N431 466 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 OR4C6Q8NH72 309 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 ATL2Q8NHH9 583 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 COG1Q8WTW3 980 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 PBKQ96KB5 322 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 TBL1YQ9BQ87 522 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 FRMD8Q9BZ67 464 aaPredicted RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 CYP4F12Q9HCS2 524 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 CNOT6Q9ULM6 557 aaKnown RBP15.14■□□□□ 0.01
LIG1-219ENST00000600055 TMEM98Q9Y2Y6 226 aa15.14■□□□□ 0.01
LIG1-219ENST00000600055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
LIG1-219ENST00000600055 CABIN1Q9Y6J0 2220 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 PRSS38A1L453 326 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 RGSL1A5PLK6 1076 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 TNFRSF10CO14798 259 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 ZSCAN5DPP0CG00 497 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 CTSEP14091 401 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 KELP23276 732 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 BLKP51451 505 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 PTPRCAPQ14761 206 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 CCDC157Q569K6 752 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 GLT6D1Q7Z4J2 308 aa15.13■□□□□ 0.01
LIG1-219ENST00000600055 PDCD7Q8N8D1 485 aaKnown RBP15.13■□□□□ 0.01
LIG1-219ENST00000600055 PRELID2Q8N945 189 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms