RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 XRCC4Q13426 336 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 GUSBP11Q6P575 273 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 SLC35F3Q8IY50 421 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 NRSN1Q8IZ57 195 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 SDR16C5Q8N3Y7 309 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 UBL4BQ8N7F7 174 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 VAT1Q99536 393 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 UBP1Q9NZI7 540 aa28.07■■■□□ 2.08
ZNF558-206ENST00000599938 CPED1A4D0V7 1026 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 SOD1P00441 154 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 PYGLP06737 847 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 GP1BAP07359 652 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 RPIAP49247 311 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 INSM1Q01101 510 aaPredicted RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 OTUD4Q01804 1114 aaKnown RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 AADACL2Q6P093 401 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 LVRNQ6Q4G3 990 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 ADAMTSL4Q6UY14 1074 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 EFL1Q7Z2Z2 1120 aaKnown RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 RAVER1Q8IY67 606 aaKnown RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 ZNF567Q8N184 647 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 KDF1Q8NAX2 398 aaPredicted RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 ACTL9Q8TC94 416 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 CCHCR1Q8TD31 782 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 RIOK2Q9BVS4 552 aaKnown RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 FRMD8Q9BZ67 464 aaPredicted RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 SUDS3Q9H7L9 328 aaPredicted RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 CARS2Q9HA77 564 aaKnown RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 PKD2L2Q9NZM6 624 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 SIRPGQ9P1W8 387 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 PACSIN2Q9UNF0 486 aaPredicted RBP28.06■■■□□ 2.08
ZNF558-206ENST00000599938 CAPN6Q9Y6Q1 641 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 ASXL3Q9C0F0 2248 aa28.06■■■□□ 2.08
ZNF558-206ENST00000599938 KMT2BQ9UMN6 2715 aaPredicted RBP28.05■■■□□ 2.08
ZNF558-206ENST00000599938 MIF4GDA9UHW6 222 aaKnown RBP28.05■■■□□ 2.08
ZNF558-206ENST00000599938 F5H423 210 aaPredicted RBP28.05■■■□□ 2.08
ZNF558-206ENST00000599938 SLC4A1P02730 911 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 PIRTP0C851 137 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 PYGMP11217 842 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 LYSMD3Q7Z3D4 306 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 ARL10Q8N8L6 244 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 KYQ8NBH2 561 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 CCDC112Q8NEF3 446 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 TSGA10Q9BZW7 698 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 TMEM168Q9H0V1 697 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 FAM153AQ9UHL3 310 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 GPR34Q9UPC5 381 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 ADGRG1Q9Y653 693 aa28.05■■■□□ 2.08
ZNF558-206ENST00000599938 TJP3O95049 919 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 NDST3O95803 873 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 PTMAP06454 111 aaKnown RBP28.04■■■□□ 2.08
ZNF558-206ENST00000599938 SPINT3P49223 89 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 CCDC70Q6NSX1 233 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 DOK6Q6PKX4 331 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 PID1Q7Z2X4 250 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 TAF8Q7Z7C8 310 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 NLRP8Q86W28 1048 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 CDKL3Q8IVW4 592 aaPredicted RBP28.04■■■□□ 2.08
ZNF558-206ENST00000599938 AGAP2Q99490 1192 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 FERMT1Q9BQL6 677 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 C10orf88Q9H8K7 445 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 ZFYVE1Q9HBF4 777 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 GULP1Q9UBP9 304 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 CLCA2Q9UQC9 943 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 DMXL2Q8TDJ6 3036 aa28.04■■■□□ 2.08
ZNF558-206ENST00000599938 EME2A4GXA9 379 aaPredicted RBP28.03■■■□□ 2.08
ZNF558-206ENST00000599938 ARHGAP6O43182 974 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 OPA1O60313 960 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 CEACAM5P06731 702 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 RBL1P28749 1068 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 TNNT3P45378 269 aaPredicted RBP28.03■■■□□ 2.08
ZNF558-206ENST00000599938 EIF3EP60228 445 aaKnown RBP28.03■■■□□ 2.08
ZNF558-206ENST00000599938 TARDBPQ13148 414 aaKnown RBP eCLIP28.03■■■□□ 2.08
ZNF558-206ENST00000599938 TRIM74Q86UV6 250 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 MAPK15Q8TD08 544 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 NAT6Q93015 286 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 FAM118BQ9BPY3 351 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 RSPH14Q9UHP6 348 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 TRHDEQ9UKU6 1024 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 SUFUQ9UMX1 484 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 SHOC2Q9UQ13 582 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 ZNF711Q9Y462 761 aa28.03■■■□□ 2.08
ZNF558-206ENST00000599938 ANKRD11Q6UB99 2663 aaPredicted RBP28.03■■■□□ 2.08
ZNF558-206ENST00000599938 MYLKQ15746 1914 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 APC2O95996 2303 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 RP1P56715 2156 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 ZZEF1O43149 2961 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 GNPDA1P46926 289 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 WNT3AP56704 352 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 CAMK2BQ13554 666 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 KDELC1Q6UW63 502 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 RNF10Q8N5U6 811 aaKnown RBP28.02■■■□□ 2.08
ZNF558-206ENST00000599938 HIC2Q96JB3 615 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 FCRL5Q96RD9 977 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 ABCG4Q9H172 646 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 MAGEE1Q9HCI5 957 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 ZMIZ1Q9ULJ6 1067 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 SLC17A4Q9Y2C5 497 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 ACACAQ13085 2346 aa28.02■■■□□ 2.08
ZNF558-206ENST00000599938 RGSL1A5PLK6 1076 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms