RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 ZNF189O75820 626 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 PIAS2O75928 621 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 CELA2BP08218 269 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 HOXC4P09017 264 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 TCP1P17987 556 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 DGKAP23743 735 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 POLD2P49005 469 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 CCT8P50990 548 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 SLC14A1Q13336 389 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 SEMA5AQ13591 1074 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 ALS2CLQ60I27 953 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 RAET1GQ6H3X3 334 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 MACC1Q6ZN28 852 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 TRIM74Q86UV6 250 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 HEATR4Q86WZ0 1026 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 ATL2Q8NHH9 583 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 RTKNQ9BST9 563 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 FGF22Q9HCT0 170 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 PAK5Q9P286 719 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 PCDHGB2Q9Y5G2 931 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 PCYT1BQ9Y5K3 369 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 ARL5AQ9Y689 179 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 SAR1BQ9Y6B6 198 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 OAS3Q9Y6K5 1087 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 KNL1Q8NG31 2342 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 LRRK1Q38SD2 2015 aa14.15□□□□□ -0.14
SHKBP1-217ENST00000598558 TCRBV7S3A2A0A539 114 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GOLGA6CA6NDK9 693 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GOLGA6BA6NDN3 693 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 TRIM38O00635 465 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GAPDHSO14556 408 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 TOR1BO14657 336 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 INPP4BO15327 924 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 SUN1O94901 812 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 CEACAM5P06731 702 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GOLGA6DP0CG33 693 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 NME1P15531 152 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 TSHRP16473 764 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 TEAD1P28347 426 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 HMGCLP35914 325 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 FDFT1P37268 417 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GPR1P46091 355 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 THOP1P52888 689 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 KIAA1024LP59773 190 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 ETF1P62495 437 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 CDK3Q00526 305 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 C1orf61Q13536 156 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 PUM1Q14671 1186 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 TCEA2Q15560 299 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 ZNF648Q5T619 568 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 ADAMTSL4Q6UY14 1074 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 SYT10Q6XYQ8 523 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GSTA5Q7RTV2 222 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 PARGQ86W56 976 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 NAXDQ8IW45 347 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 RAVER1Q8IY67 606 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 CCDC89Q8N998 374 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 OR52K1Q8NGK4 314 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 BAHD1Q8TBE0 780 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 CCHCR1Q8TD31 782 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 PDXPQ96GD0 296 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 COX14Q96I36 57 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 WDR92Q96MX6 357 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 FRMD8Q9BZ67 464 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 CLPBQ9H078 707 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 WDR26Q9H7D7 661 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 LRRC40Q9H9A6 602 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 IL26Q9NPH9 171 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 HOMER3Q9NSC5 361 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 KCTD5Q9NXV2 234 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 GOLGA6AQ9NYA3 693 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 PKD2L2Q9NZM6 624 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 PCOLCE2Q9UKZ9 415 aa14.14□□□□□ -0.15
SHKBP1-217ENST00000598558 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 GPR39O43194 453 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 LDB2O43679 373 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 PHF2O75151 1096 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 KCNK5O95279 499 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 KRT14P02533 472 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 JUNDP17535 347 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 ARRB1P49407 418 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 VPS41P49754 854 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 TERF1P54274 439 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 SRP54P61011 504 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 PTK2BQ14289 1009 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 CERCAMQ5T4B2 595 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 CCDC137Q6PK04 289 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 RD3Q7Z3Z2 195 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 GLT6D1Q7Z4J2 308 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 HID1Q8IV36 788 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 PHACTR4Q8IZ21 702 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 OXR1Q8N573 874 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 EID2Q8N6I1 236 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 OR56A4Q8NGH8 313 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 OR13C4Q8NGS5 318 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 BRSK1Q8TDC3 778 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 RHBDD1Q8TEB9 315 aa14.13□□□□□ -0.15
SHKBP1-217ENST00000598558 SETD7Q8WTS6 366 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms