RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CCDC22O60826 627 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 DIAPH2O60879 1101 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 CLASP2O75122 1294 aaKnown RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 CYBBP04839 570 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 TFEBP19484 476 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ATP5F1P24539 256 aaPredicted RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 FMO4P31512 558 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 SUOXP51687 545 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 PLK1P53350 603 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 FUT11Q495W5 492 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 LYSMD3Q7Z3D4 306 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ISCA2Q86U28 154 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 VOPP1Q96AW1 172 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ZSWIM3Q96MP5 696 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 LINC00597Q9H2U6 94 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ALG9Q9H6U8 611 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 CYP4F12Q9HCS2 524 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 TDP1Q9NUW8 608 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 GEMIN8Q9NWZ8 242 aaKnown RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 ZDHHC2Q9UIJ5 367 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 APOBEC2Q9Y235 224 aaKnown RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 RAP2CQ9Y3L5 183 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 A8MT66 165 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 PRR5-ARHGAP8B1AHC4 643 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 GPR39O43194 453 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ZBTB14O43829 449 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 DDX6P26196 483 aaKnown RBP eCLIP17■□□□□ 0.31
SHKBP1-216ENST00000598201 SLC26A3P40879 764 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 RASSF2P50749 326 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 ARHGAP8P85298 464 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 SLC9B1Q4ZJI4 515 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 SETMARQ53H47 684 aaPredicted RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 KLC3Q6P597 504 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 EPGNQ6UW88 154 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 RINLQ6ZS11 566 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 PPP2R3CQ969Q6 453 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 PTERQ96BW5 349 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 TUBB6Q9BUF5 446 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 NSUN3Q9H649 340 aaKnown RBP17■□□□□ 0.31
SHKBP1-216ENST00000598201 IL17CQ9P0M4 197 aa17■□□□□ 0.31
SHKBP1-216ENST00000598201 HTRA2O43464 458 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 OR1I1O60431 355 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 ENO1P06733 434 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 RBP1P09455 135 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 SRCP12931 536 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 CALB2P22676 271 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 DNAJB13P59910 316 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 XIAPP98170 497 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 BCL2L1Q07817 233 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 PRSS36Q5K4E3 855 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 GRASPQ7Z6J2 395 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 MYLIPQ8WY64 445 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 BIRC8Q96P09 236 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 MAGEE1Q9HCI5 957 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 HACD3Q9P035 362 aa16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 PRRC2BQ5JSZ5 2229 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-216ENST00000598201 NEDD8-MDP1E9PL57 170 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 MATN2O00339 956 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 NDUFS3O75489 264 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 FGF19O95750 216 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 PENKP01210 267 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ESRRAP11474 423 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 CD1DP15813 335 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ZNF37AP17032 561 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 HOXB8P17481 243 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 CPA2P48052 419 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 NRIP1P48552 1158 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 CSNK1DP48730 415 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 RPL14P50914 215 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 RPS27LQ71UM5 84 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 LONP2Q86WA8 852 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ZSWIM9Q86XI8 627 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 GUCD1Q96NT3 240 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 TCF12Q99081 682 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 GPR63Q9BZJ6 419 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 GALPQ9UBC7 116 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 FAM50BQ9Y247 325 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 H3BMM5 538 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 H7C0S8 307 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 GRID2O43424 1007 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 HNRNPCL1O60812 293 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 IPO13O94829 963 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 HOXA9P31269 272 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 PRKAA1Q13131 559 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 TCEAL5Q5H9L2 206 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 CFAP157Q5JU67 520 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 RTL10Q7L3V2 364 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 RYBPQ8N488 228 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 OR2AP1Q8NGE2 309 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ING5Q8WYH8 240 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 PHF21BQ96EK2 531 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 RAB3IPQ96QF0 476 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 BBS2Q9BXC9 721 aa16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 CADM1Q9BY67 442 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-216ENST00000598201 ATG2AQ2TAZ0 1938 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms