RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 GPR1P46091 355 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF135P52742 658 aaPredicted RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 DSC2Q02487 901 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ILF3Q12906 894 aaKnown RBP eCLIP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 NR1D2Q14995 579 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 TDRD12Q587J7 1177 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ARMC12Q5T9G4 340 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 HGSNATQ68CP4 663 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 LRRC66Q68CR7 880 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 TECPR1Q7Z6L1 1165 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 PIM3Q86V86 326 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 DTX1Q86Y01 620 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 PIH1D2Q8WWB5 315 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 SCAMP4Q969E2 229 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 MCCC1Q96RQ3 725 aaPredicted RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 THAP2Q9H0W7 228 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ABCG8Q9H221 673 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 MRPL47Q9HD33 250 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 TRNAU1APQ9NX07 287 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 ANAPC7Q9UJX3 599 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 SLC17A4Q9Y2C5 497 aa12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 FLNBO75369 2602 aaKnown RBP12.06□□□□□ -0.48
SOX2-OT-228ENST00000597828 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 TRBV23OR9-2A0A075B6M9 112 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 A0A1W2PQC6 194 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 PSMD11O00231 422 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 INPP4BO15327 924 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 FZD6O60353 706 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 EML2O95834 649 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 IVLP07476 585 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 FAM87AP0C7U9 286 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 MYBL1P10243 752 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 IL4RP24394 825 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 ACTR1BP42025 376 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 CDH6P55285 790 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 ACTR1AP61163 376 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 ITKQ08881 620 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 FILIP1LQ4L180 1135 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 ATP13A4Q4VNC1 1196 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 MARC1Q5VT66 337 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 NCBP2-AS2Q69YL0 99 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 USP45Q70EL2 814 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 TRIM11Q96F44 468 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 SCRN2Q96FV2 425 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 OR2M4Q96R27 311 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 NUP85Q9BW27 656 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 PIKFYVEQ9Y2I7 2098 aa12.05□□□□□ -0.48
SOX2-OT-228ENST00000597828 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 IGHV1OR21-1A0A087WYE8 117 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 A0A1W2PQ67 120 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 FGF3P11487 239 aaPredicted RBP12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 SERPINB6P35237 376 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 BIRC2Q13490 618 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 KRT81Q14533 505 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 IQCB1Q15051 598 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 NFKBIBQ15653 356 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 BOLA3Q53S33 107 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 BBS5Q8N3I7 341 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 TEX26Q8N6G2 289 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 NIPA2Q8N8Q9 360 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 SLC37A2Q8TED4 501 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 TEKT4Q8WW24 435 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 TMEM159Q96B96 161 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 ARHGAP9Q9BRR9 750 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 CDH19Q9H159 772 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 OCIAD1Q9NX40 245 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 CHKBQ9Y259 395 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 PPIL1Q9Y3C6 166 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 PRKAB1Q9Y478 270 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 TTLL3Q9Y4R7 772 aa12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 OAS3Q9Y6K5 1087 aaKnown RBP12.04□□□□□ -0.48
SOX2-OT-228ENST00000597828 SPENQ96T58 3664 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 A0A087X0T9 212 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 A0A0J9YYE9 177 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 SMTNL1A8MU46 457 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 TRBC1P01850 177 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ATP1A1P05023 1023 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 HLA-DQB2P05538 268 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 FAM228BP0C875 321 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 THRAP10827 490 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ITGB6P18564 788 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 TEAD1P28347 426 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 GARSP41250 739 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 SSR1P43307 286 aaKnown RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ZNF165P49910 485 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 ARSEP51690 589 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 LIMK2P53671 638 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 PTSQ03393 145 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 DPTQ07507 201 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 GALNT2Q10471 571 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 DPYSL3Q14195 570 aa12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 PIGHQ14442 188 aaPredicted RBP12.03□□□□□ -0.48
SOX2-OT-228ENST00000597828 NR1I3Q14994 352 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms