RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TMEM98Q9Y2Y6 226 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SCINQ9Y6U3 715 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
CHMP2A-202ENST00000596708 SPTA1P02549 2419 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 IGHV1OR21-1A0A087WYE8 117 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 A0A0U1RQS6 177 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 NPIPB15A6NHN6 443 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 TERTO14746 1132 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SUV39H1O43463 412 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 MAFKO60675 156 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 PGLSO95336 258 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ASMTLO95671 621 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 IL1R2P27930 398 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 TEAD1P28347 426 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 MMP13P45452 471 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 CDH6P55285 790 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 CLCA4Q14CN2 919 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 NCAPHQ15003 741 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 BOLA3Q53S33 107 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 MARK2Q7KZI7 788 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ZNF571Q7Z3V5 609 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 POLNQ7Z5Q5 900 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 TECPR1Q7Z6L1 1165 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 FAM129CQ86XR2 697 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 CACNA2D3Q8IZS8 1091 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 AOPEPQ8N6M6 819 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 OR4D9Q8NGE8 314 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ART4Q93070 314 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 PMEPA1Q969W9 287 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 AP2M1Q96CW1 435 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 OR2M4Q96R27 311 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC38A3Q99624 504 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 DPYSL5Q9BPU6 564 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 MGME1Q9BQP7 344 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC12A9Q9BXP2 914 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC25A18Q9H1K4 315 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ABCG8Q9H221 673 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 HSD3B7Q9H2F3 369 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 NT5MQ9NPB1 228 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 GEMIN8Q9NWZ8 242 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 OCIAD1Q9NX40 245 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 SLC17A4Q9Y2C5 497 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ST14Q9Y5Y6 855 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 B3GALT1Q9Y5Z6 326 aa10.52□□□□□ -0.73
CHMP2A-202ENST00000596708 ASH1LQ9NR48 2969 aaKnown RBP10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 EFCAB7A8K855 629 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 A8MU76 341 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PEX11BO96011 259 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PDHA1P08559 390 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 RARAP10276 462 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 THRAP10827 490 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 SKILP12757 684 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 SERPINB6P35237 376 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 UGT1A3P35503 534 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PCK1P35558 622 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 ARSDP51689 593 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 EPHB1P54762 984 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 DPTQ07507 201 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 KLHL30Q0D2K2 578 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 FILIP1LQ4L180 1135 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 SNAP47Q5SQN1 464 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 DCAF12Q5T6F0 453 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 LRRC66Q68CR7 880 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 BORAQ6PGQ7 559 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 RFLNAQ6ZTI6 216 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 TRIM74Q86UV6 250 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 ZNF761Q86XN6 746 aaPredicted RBP10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PTRH1Q86Y79 214 aaKnown RBP10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 GALNT13Q8IUC8 556 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PIH1D2Q8WWB5 315 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 SCAMP4Q969E2 229 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 TRIM11Q96F44 468 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 CSPG4P5Q96PW8 444 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 FUCA2Q9BTY2 467 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 AIPL1Q9NZN9 384 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 TMEM9Q9P0T7 183 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PPIL1Q9Y3C6 166 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 PCDHGA3Q9Y5H0 932 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 BSNQ9UPA5 3926 aa10.51□□□□□ -0.73
CHMP2A-202ENST00000596708 DDX3XO00571 662 aaKnown RBP eCLIP10.5□□□□□ -0.732e-8■■■■■ 35.4
CHMP2A-202ENST00000596708 INPP4BO15327 924 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 RAD1O60671 282 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 PYGLP06737 847 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 MYBL1P10243 752 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 LIFP15018 202 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 TCF4P15884 667 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 CSF2RBP32927 897 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 GPLD1P80108 840 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 PTSQ03393 145 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 SQSTM1Q13501 440 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 KRT81Q14533 505 aa10.5□□□□□ -0.73
CHMP2A-202ENST00000596708 PYCR3Q53H96 274 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms