RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KCTD5Q9NXV2 234 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 KLHL8Q9P2G9 620 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 SPASTQ9UBP0 616 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 KLQ9UEF7 1012 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 DNPEPQ9ULA0 475 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 PCDHGA1Q9Y5H4 931 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 SPO11Q9Y5K1 396 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 DGKBQ9Y6T7 804 aa10.96□□□□□ -0.65
SHKBP1-206ENST00000595523 CHD6Q8TD26 2715 aa10.96□□□□□ -0.66
SHKBP1-206ENST00000595523 LOC285095A0A1B0GVY8 99 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 PRSS38A1L453 326 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 NEMP2A6NFY4 417 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 LMO7DNF2Z398 122 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 TPP1O14773 563 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 AURKAO14965 403 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 YY2O15391 372 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 TJP3O95049 919 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 NDST3O95803 873 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CEACAM5P06731 702 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CCDC175P0C221 793 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CHRNA4P43681 627 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 SPINT3P49223 89 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 WNT3AP56704 352 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 HENMT1Q5T8I9 393 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CCDC181Q5TID7 509 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 RAET1GQ6H3X3 334 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 ZCCHC8Q6NZY4 707 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 ADAMTSL4Q6UY14 1074 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 TMPRSS7Q7RTY8 843 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 PID1Q7Z2X4 250 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 RD3Q7Z3Z2 195 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 TRIM74Q86UV6 250 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 NLRP8Q86W28 1048 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CDKL3Q8IVW4 592 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 AP2M1Q96CW1 435 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 DUSP23Q9BVJ7 150 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 RIOK2Q9BVS4 552 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 BOCQ9BWV1 1114 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 FRMD8Q9BZ67 464 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 GBA3Q9H227 469 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 USP29Q9HBJ7 922 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 MAGEE1Q9HCI5 957 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 LZTFL1Q9NQ48 299 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 CNOT6Q9ULM6 557 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 SHOC2Q9UQ13 582 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 MSRB2Q9Y3D2 182 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 ZNF711Q9Y462 761 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 PIKFYVEQ9Y2I7 2098 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6CA6NDK9 693 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6BA6NDN3 693 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6L3A6NEY3 463 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 FADS2P1A8MWK0 482 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 C1QTNF9BB2RNN3 333 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 TNFRSF10CO14798 259 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 KCNN4O15554 427 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6DP0CG33 693 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ALPPL2P10696 532 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 KELP23276 732 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR1P46091 355 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 POLD2P49005 469 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 BLKP51451 505 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 DAB2P98082 770 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 SIRPB2Q5JXA9 342 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ANKRD20A2Q5SQ80 823 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 C6orf132Q5T0Z8 1188 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 MEI1Q5TIA1 1274 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ANKRD20A1Q5TYW2 823 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ANKRD20A3Q5VUR7 823 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 DARS2Q6PI48 645 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 CCNI2Q6ZMN8 369 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 SFTPA2Q8IWL1 248 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC35F3Q8IY50 421 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 RAVER1Q8IY67 606 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 NRSN1Q8IZ57 195 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 FSTL5Q8N475 847 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GPR26Q8NDV2 337 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 CCL4L1Q8NHW4 92 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC35B2Q8TB61 432 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 COX14Q96I36 57 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 TMEM168Q9H0V1 697 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ZFYVE1Q9HBF4 777 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 CYP4F12Q9HCS2 524 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 PHPT1Q9NRX4 125 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 GOLGA6AQ9NYA3 693 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 SLC17A4Q9Y2C5 497 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 ST14Q9Y5Y6 855 aa10.94□□□□□ -0.66
SHKBP1-206ENST00000595523 CFAP47Q6ZTR5 3102 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 FAM149AA5PLN7 773 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 CASC3O15234 703 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 TNFP01375 233 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 EPOP01588 193 aa10.93□□□□□ -0.66
SHKBP1-206ENST00000595523 ANXA6P08133 673 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms