RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MSANTD3Q96H12 275 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 SGSM3Q96HU1 749 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
VMP1-217ENST00000593168 TBATAQ96M53 351 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 SMIM14Q96QK8 99 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 MCCC1Q96RQ3 725 aaPredicted RBP13.46□□□□□ -0.25
VMP1-217ENST00000593168 AGAP2Q99490 1192 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 GPR63Q9BZJ6 419 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 IL17CQ9P0M4 197 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 PPM1HQ9ULR3 514 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 F5P12259 2224 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 MUC22E2RYF6 1773 aaPredicted RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 GOLGA8TH3BQL2 631 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 K7EQS6 105 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 HRO43593 1189 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 GDF9O60383 454 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 MT-ND3P03897 115 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 CTSLP07711 333 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 ALPIP09923 528 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 CHRNB1P11230 501 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 HLA-EP13747 358 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 CCR3P51677 355 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 PPP2R2AP63151 447 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 EGFLAMQ63HQ2 1017 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 STK40Q8N2I9 435 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 CBARPQ8N350 705 aaPredicted RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 ZNF366Q8N895 744 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 C2CD4AQ8NCU7 369 aaPredicted RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 OR13C4Q8NGS5 318 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 GPR150Q8NGU9 434 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 OR6P1Q8NGX9 317 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 ALKBH8Q96BT7 664 aaKnown RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 FAM129BQ96TA1 746 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 RBBP8Q99708 897 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 IER2Q9BTL4 223 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
VMP1-217ENST00000593168 SEMA4GQ9NTN9 838 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 PKP3Q9Y446 797 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 PSAT1Q9Y617 370 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 STON1Q9Y6Q2 735 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 CFAP47Q6ZTR5 3102 aa13.45□□□□□ -0.26
VMP1-217ENST00000593168 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 A0A1W2PPM1 405 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 HMX2A2RU54 273 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 CCDC162PA2VCL2 907 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 CHURC1-FNTBB4DL54 471 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 BUD23O43709 281 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 LRP3O75074 770 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 GOT2P00505 430 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 ITGA2BP08514 1039 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 TIMP2P16035 220 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 OGNP20774 298 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 DRD1P21728 446 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 HPDP32754 393 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 KIR2DL1P43626 348 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 LEPRP48357 1165 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 POLD2P49005 469 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 FNTBP49356 437 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 LIMK2P53671 638 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 SLC18A1P54219 525 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 TMPRSS15P98073 1019 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 SIM2Q14190 667 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 PTPRRQ15256 657 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 TMEM196Q5HYL7 178 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 MRNIPQ6NTE8 343 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 TXNDC11Q6PKC3 985 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 AFTPHQ6ULP2 937 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 CRTC1Q6UUV9 634 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 PRR23CQ6ZRP0 262 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 LYSMD3Q7Z3D4 306 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 DSG4Q86SJ6 1040 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 SRRM1Q8IYB3 904 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 ZNF513Q8N8E2 541 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 OR4L1Q8NH43 312 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 EZH1Q92800 747 aaPredicted RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 EID2BQ96D98 161 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 SMC6Q96SB8 1091 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 ACOX2Q99424 681 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 RHOJQ9H4E5 214 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 CNOT10Q9H9A5 744 aaKnown RBP13.44□□□□□ -0.26
VMP1-217ENST00000593168 PRSS16Q9NQE7 514 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 FBXO5Q9UKT4 447 aa13.44□□□□□ -0.26
VMP1-217ENST00000593168 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 UPK3BL1B0FP48 263 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 UPK3BL2E5RIL1 263 aa13.43□□□□□ -0.26
VMP1-217ENST00000593168 CD3EAPO15446 510 aaKnown RBP13.43□□□□□ -0.26
VMP1-217ENST00000593168 CLDN7O95471 211 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms