RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 A0A087WUV0 522 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TSPAN11A1L157 253 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 SDR42E2A6NKP2 422 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 F5H423 210 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TRAFD1O14545 582 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 HTRA2O43464 458 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 SH3BP5O60239 455 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 NDUFS2O75306 463 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PMPCBO75439 489 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PGLSO95336 258 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 CFIP05156 583 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ADRB3P13945 408 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TIMP2P16035 220 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PTGER3P43115 390 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 NPY2RP49146 381 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 IFFO1Q0D2I5 559 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 CDH17Q12864 832 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TRAF2Q12933 501 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 MSS51Q4VC12 460 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 HSP90B2PQ58FF3 399 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PIP5KL1Q5T9C9 394 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 AGBL4Q5VU57 503 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 SLC36A4Q6YBV0 504 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 LPCAT2Q7L5N7 544 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PALM2Q8IXS6 379 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TMEFF1Q8IYR6 380 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 GOLGA6L1Q8N7Z2 621 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 FRMD1Q8N878 549 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 FBXO36Q8NEA4 188 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 OR2I1PQ8NGU4 316 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TADA1Q96BN2 335 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ECHDC3Q96DC8 303 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TOE1Q96GM8 510 aaKnown RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 OXNAD1Q96HP4 312 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TBL1YQ9BQ87 522 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 TDRD1Q9BXT4 1180 aaKnown RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ROPN1BQ9BZX4 212 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 PPCSQ9HAB8 311 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ROPN1Q9HAT0 212 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 FAM53CQ9NYF3 392 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 WSB2Q9NYS7 404 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 BFARQ9NZS9 450 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 NFS1Q9Y697 457 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ANKRD36A6QL64 1941 aa11.91□□□□□ -0.5
DDX39A-219ENST00000592927 ASCC3Q8N3C0 2202 aaKnown RBP11.91□□□□□ -0.5
DDX39A-219ENST00000592927 MAGEB16A2A368 324 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 FAM47DPA6NHR8 397 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 GOLGA6L10A6NI86 522 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PYCARD-AS1I3L0S3 204 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 NEMP1O14524 444 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PLRG1O43660 514 aaKnown RBP11.9□□□□□ -0.5
DDX39A-219ENST00000592927 TCEA3O75764 348 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SEMA4FO95754 770 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 MT-CYBP00156 380 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-219ENST00000592927 CPP00450 1065 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 IVLP07476 585 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 NFKBIAP25963 317 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ACSL1P33121 698 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ELK3P41970 407 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SUOXP51687 545 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 EPHB1P54762 984 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ADPRHP54922 357 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 RPL6Q02878 288 aaKnown RBP11.9□□□□□ -0.5
DDX39A-219ENST00000592927 CFHR1Q03591 330 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 KCNC4Q03721 635 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 IHHQ14623 411 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 STAT4Q14765 748 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PCSK7Q16549 785 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 UGP2Q16851 508 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SYCP2LQ5T4T6 812 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ERAP2Q6P179 960 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SLCO6A1Q86UG4 719 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 MINDY1Q8N5J2 469 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 DNAAF3Q8N9W5 541 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 FAM131CQ96AQ9 280 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SIGLEC10Q96LC7 697 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 EBNA1BP2Q99848 306 aaKnown RBP11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SH3GL2Q99962 352 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 FSD1LQ9BXM9 530 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ADGRE3Q9BY15 652 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 IL22Q9GZX6 179 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 KDM4CQ9H3R0 1056 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PRORYQ9H606 182 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 ARNT2Q9HBZ2 717 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 LRRC4CQ9HCJ2 640 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PHTF1Q9UMS5 762 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 SLC6A14Q9UN76 642 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
DDX39A-219ENST00000592927 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
DDX39A-219ENST00000592927 TBC1D3DA0A087WVF3 549 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms