RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GPR1P46091 355 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 POLD2P49005 469 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 SPINT3P49223 89 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 WNT3AP56704 352 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 EIF3EP60228 445 aaKnown RBP22.27■■□□□ 1.16
MBD3-208ENST00000590830 CCZ1BP86790 482 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 CCZ1P86791 482 aaPredicted RBP22.27■■□□□ 1.16
MBD3-208ENST00000590830 C6orf132Q5T0Z8 1188 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 ADAMTSL4Q6UY14 1074 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 SLC35F3Q8IY50 421 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 UBL4BQ8N7F7 174 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 VAT1Q99536 393 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 GORASP1Q9BQQ3 440 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 TMEM168Q9H0V1 697 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 USP29Q9HBJ7 922 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 CYP4F12Q9HCS2 524 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 GOLGA6AQ9NYA3 693 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 FAM153AQ9UHL3 310 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 CNOT6Q9ULM6 557 aaKnown RBP22.27■■□□□ 1.16
MBD3-208ENST00000590830 SPO11Q9Y5K1 396 aa22.27■■□□□ 1.16
MBD3-208ENST00000590830 PTPRBP23467 1997 aa22.27■■□□□ 1.15
MBD3-208ENST00000590830 TCRBV7S2A1N4TA0A589 114 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 PDE2AO00408 941 aaPredicted RBP22.26■■□□□ 1.15
MBD3-208ENST00000590830 TJP3O95049 919 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 NDST3O95803 873 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 PROS1P07225 676 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 CDK4P11802 303 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 INSM1Q01101 510 aaPredicted RBP22.26■■□□□ 1.15
MBD3-208ENST00000590830 CAMK2BQ13554 666 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 ELOCQ15369 112 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 GUSBP11Q6P575 273 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 TMPRSS12Q86WS5 348 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 RAVER1Q8IY67 606 aaKnown RBP22.26■■□□□ 1.15
MBD3-208ENST00000590830 GALNT15Q8N3T1 639 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 CCDC112Q8NEF3 446 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 CCL4L1Q8NHW4 92 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 MRGPRX2Q96LB1 330 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 MAGEE1Q9HCI5 957 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 TRHDEQ9UKU6 1024 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 SHOC2Q9UQ13 582 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 WDFY3Q8IZQ1 3526 aa22.26■■□□□ 1.15
MBD3-208ENST00000590830 PRSS38A1L453 326 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 AURKAO14965 403 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 RBP3P10745 1247 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 CETN2P41208 172 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 KLF1Q13351 362 aaPredicted RBP22.25■■□□□ 1.15
MBD3-208ENST00000590830 HES3Q5TGS1 186 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 LVRNQ6Q4G3 990 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 TMC3Q7Z5M5 1100 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 TRIM74Q86UV6 250 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 TSGA10Q9BZW7 698 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 ZFYVE1Q9HBF4 777 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 MOSPD1Q9UJG1 213 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 SLC17A4Q9Y2C5 497 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 R3HDM2Q9Y2K5 976 aaKnown RBP22.25■■□□□ 1.15
MBD3-208ENST00000590830 TMEM98Q9Y2Y6 226 aa22.25■■□□□ 1.15
MBD3-208ENST00000590830 LRP4O75096 1905 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 CPED1A4D0V7 1026 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 EME2A4GXA9 379 aaPredicted RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 CHRNA4P43681 627 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 DUSP3P51452 185 aaPredicted RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 NR0B2Q15466 257 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 SIRPB2Q5JXA9 342 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 HENMT1Q5T8I9 393 aaKnown RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 DARS2Q6PI48 645 aaKnown RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 SFTPA2Q8IWL1 248 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 SDR16C5Q8N3Y7 309 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 IFI44Q8TCB0 444 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 CCHCR1Q8TD31 782 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 SCARF2Q96GP6 870 aaPredicted RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 COX14Q96I36 57 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 FAM83DQ9H4H8 585 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 CARS2Q9HA77 564 aaKnown RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 SUFUQ9UMX1 484 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 ZNF711Q9Y462 761 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 ST14Q9Y5Y6 855 aa22.24■■□□□ 1.15
MBD3-208ENST00000590830 GOLGA4Q13439 2230 aaKnown RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 MAP1BP46821 2468 aaKnown RBP22.24■■□□□ 1.15
MBD3-208ENST00000590830 RGSL1A5PLK6 1076 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 FADS2P1A8MWK0 482 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 CASC3O15234 703 aaKnown RBP22.23■■□□□ 1.15
MBD3-208ENST00000590830 INPP4BO15327 924 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 KRT86O43790 486 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 OPA1O60313 960 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 EPOP01588 193 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 JUPP14923 745 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 E2F1Q01094 437 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 TARDBPQ13148 414 aaKnown RBP eCLIP22.23■■□□□ 1.15
MBD3-208ENST00000590830 ANKRD20A2Q5SQ80 823 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 PERM1Q5SV97 790 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 ANKRD20A1Q5TYW2 823 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 ANKRD20A3Q5VUR7 823 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 ZNF662Q6ZS27 426 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 EFL1Q7Z2Z2 1120 aaKnown RBP22.23■■□□□ 1.15
MBD3-208ENST00000590830 GKN2Q86XP6 184 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 NRROSQ86YC3 692 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 CDKL3Q8IVW4 592 aaPredicted RBP22.23■■□□□ 1.15
MBD3-208ENST00000590830 SLC25A41Q8N5S1 370 aa22.23■■□□□ 1.15
MBD3-208ENST00000590830 KDF1Q8NAX2 398 aaPredicted RBP22.23■■□□□ 1.15
MBD3-208ENST00000590830 GPR26Q8NDV2 337 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms