RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ADRA1DP25100 572 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 DRD3P35462 400 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 NEK3P51956 506 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 CCDC15Q0P6D6 951 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 SFSWAPQ12872 951 aaKnown RBP16.59■□□□□ 0.25
GCDH-213ENST00000590627 LAMB3Q13751 1172 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 CDKN3Q16667 212 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 FAM153CQ494X1 144 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 IL27RAQ6UWB1 636 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 GLRX5Q86SX6 157 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 TTC7BQ86TV6 843 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 CCNJLQ8IV13 435 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
GCDH-213ENST00000590627 AADATQ8N5Z0 425 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 PAF1Q8N7H5 531 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 CAMK1GQ96NX5 476 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 EBNA1BP2Q99848 306 aaKnown RBP16.59■□□□□ 0.25
GCDH-213ENST00000590627 C19orf43Q9BQ61 176 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 KIFC1Q9BW19 673 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 TXLNGYQ9BZA5 131 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 MIR1-1HGQ9H1L0 117 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 MRM3Q9HC36 420 aaKnown RBP16.59■□□□□ 0.25
GCDH-213ENST00000590627 SAYSD1Q9NPB0 183 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 SPO11Q9Y5K1 396 aa16.59■□□□□ 0.25
GCDH-213ENST00000590627 FREM2Q5SZK8 3169 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 UQCRHLA0A096LP55 91 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 HEATR9A2RTY3 570 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 MROH6A6NGR9 719 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 AREL1O15033 823 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 BCAT2O15382 392 aaPredicted RBP16.58■□□□□ 0.24
GCDH-213ENST00000590627 UQCRHP07919 91 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 FTH1P19P0C7X4 201 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 ADRB3P13945 408 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 CTPS1P17812 591 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 PSMA3P25788 255 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 HNF1BP35680 557 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 MAGEA4P43358 317 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 MTM1Q13496 603 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 TAF1AQ15573 450 aaPredicted RBP16.58■□□□□ 0.24
GCDH-213ENST00000590627 POM121L1PQ3SYA9 428 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 MAP9Q49MG5 647 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 CCDC38Q502W7 563 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 PIP5KL1Q5T9C9 394 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 FBXL19Q6PCT2 694 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 USP30Q70CQ3 517 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 CCDC25Q86WR0 208 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 MPP5Q8N3R9 675 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 PEX13Q92968 403 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 CAVIN3Q969G5 261 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 WDR83Q9BRX9 315 aaKnown RBP16.58■□□□□ 0.24
GCDH-213ENST00000590627 PCDH12Q9NPG4 1184 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 RIMKLBQ9ULI2 386 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 SOX13Q9UN79 622 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.24
GCDH-213ENST00000590627 TCAF1Q9Y4C2 921 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 ATRXP46100 2492 aa16.58■□□□□ 0.24
GCDH-213ENST00000590627 DSPP15924 2871 aaKnown RBP16.58■□□□□ 0.24
GCDH-213ENST00000590627 FAM237BA0A1B0GVD1 139 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 NPIPB15A6NHN6 443 aaPredicted RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 SLC7A4O43246 635 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 LDB2O43679 373 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 AP1G1O43747 822 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 CBFA2T3O75081 653 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 BANF1O75531 89 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 CRTAMO95727 393 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 DNTTP04053 509 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ALPIP09923 528 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 CYP2A6P11509 494 aaPredicted RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 TSHRP16473 764 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 XPAP23025 273 aaPredicted RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 VIPR1P32241 457 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ELK3P41970 407 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ABL2P42684 1182 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 CRADDP78560 199 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 POU6F1Q14863 301 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 FASTKD3Q14CZ7 662 aaKnown RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 AGBL4Q5VU57 503 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ERAP2Q6P179 960 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 DPPA4Q7L190 304 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 NLRP9Q7RTR0 991 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 TMC3Q7Z5M5 1100 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 TMEM135Q86UB9 458 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 IGDCC3Q8IVU1 814 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 ZBED8Q8IZ13 594 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 TTC30BQ8N4P2 665 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 PPHLN1Q8NEY8 458 aaKnown RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 C1orf216Q8TAB5 229 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 BLOC1S5Q8TDH9 187 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 PYROXD1Q8WU10 500 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 HNRNPLLQ8WVV9 542 aaKnown RBP16.57■□□□□ 0.24
GCDH-213ENST00000590627 STAMBPL1Q96FJ0 436 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 SMIM14Q96QK8 99 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 GAREM1Q9H706 876 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
GCDH-213ENST00000590627 B4GALT6Q9UBX8 382 aa16.57■□□□□ 0.24
GCDH-213ENST00000590627 EIF2B4Q9UI10 523 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms