RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 SPPL2AQ8TCT8 520 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 SELENOMQ8WWX9 145 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 RTP4Q96DX8 246 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 MAGEL2Q9UJ55 1249 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 SYNDIG1LA6NDD5 238 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 DNAJA2O60884 412 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 IL1BP01584 269 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 CYP2A7P20853 494 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 MAPK11Q15759 364 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 GLYATQ6IB77 296 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 SVOPQ8N4V2 548 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 SEPT8Q92599 483 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 MRPS31Q92665 395 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 SLC25A13Q9UJS0 675 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 H3BNX3 289 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 ZBTB14O43829 449 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 PAX3P23760 479 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 RUNX1T1Q06455 604 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 GALNT2Q10471 571 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 TAF10Q12962 218 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 CCNIQ14094 377 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 HNRNPDQ14103 355 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 SPATA17Q96L03 361 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 ROGDIQ9GZN7 287 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 PADI3Q9ULW8 664 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 SQORQ9Y6N5 450 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 COL4A1P02462 1669 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 MANSC4A6NHS7 340 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 SH3BGRLO75368 114 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 LRG1P02750 347 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 POU1F1P28069 291 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 NR1D2Q14995 579 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 ADAMTSL2Q86TH1 951 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 PIDD1Q9HB75 910 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 SH3BP4Q9P0V3 963 aa17.08■□□□□ 0.33
SMARCA4-215ENST00000590574 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC7A4O43246 635 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 WDR47O94967 919 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 DDX5P17844 614 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 ATP6V1E1P36543 226 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 ARHGAP36Q6ZRI8 547 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 RPS27LQ71UM5 84 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC44A2Q8IWA5 706 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 AHI1Q8N157 1196 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 OTULINQ96BN8 352 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 CENPNQ96H22 339 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 TLE6Q9H808 572 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 E7ENX8 843 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 IRAK2O43187 625 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 PIK3CGP48736 1102 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 EPHB3P54753 998 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 DGUOKQ16854 277 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 HECTD3Q5T447 861 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 STEAP4Q687X5 459 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 ANKRD23Q86SG2 305 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 UTP15Q8TED0 518 aaKnown RBP17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
SMARCA4-215ENST00000590574 EPB42P16452 691 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 NDST2P52849 883 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 MTTPP55157 894 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SYT12Q8IV01 421 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 HOMEZQ8IX15 550 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 OFCC1Q8IZS5 231 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 STYXQ8WUJ0 223 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC47A1Q96FL8 570 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 HAPLN3Q96S86 360 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SMPD3Q9NY59 655 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ARL5AQ9Y689 179 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 G3V2T6 193 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 PIRO00625 290 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 RNASEH1O60930 286 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 OR56A5P0C7T3 313 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 GM2AP17900 193 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 IMPDH1P20839 514 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 TRAP1Q12931 704 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 TOP3AQ13472 1001 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 TMEM63BQ5T3F8 832 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 NRG4Q8WWG1 115 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 EMILIN2Q9BXX0 1053 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ZNHIT2Q9UHR6 403 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 H6PDO95479 791 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SLC7A1P30825 629 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ARMC3Q5W041 872 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 ARRDC4Q8NCT1 418 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 EZH1Q92800 747 aaPredicted RBP17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 SMOQ99835 787 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 C3orf18Q9UK00 162 aa17.07■□□□□ 0.32
SMARCA4-215ENST00000590574 FAM189A1O60320 539 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms