RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 EXTL3O43909 919 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 CPNE3O75131 537 aaKnown RBP7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 CABYRO75952 493 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 LRIG2O94898 1065 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ARHGEF15O94989 841 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 GPIP06744 558 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 KRT19P08727 400 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 CD19P15391 556 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ITGB6P18564 788 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 CHRM3P20309 590 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 PSMB9P28065 219 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 UQCRC1P31930 480 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 SLC9A3P48764 834 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ARSFP54793 590 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 C1QTNF8P60827 252 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 CD47Q08722 323 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 EIF2B5Q13144 721 aaKnown RBP7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 STK11Q15831 433 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 SEZ6Q53EL9 994 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 LAIR2Q6ISS4 152 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 GALNT7Q86SF2 657 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 STK32CQ86UX6 486 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 XYLT1Q86Y38 959 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 DNERQ8NFT8 737 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 KCTD4Q8WVF5 259 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 TTC9Q92623 222 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 RORBQ92753 470 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 GTF2H4Q92759 462 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ISL2Q96A47 359 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 YIPF6Q96EC8 236 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ZNF300Q96RE9 604 aaPredicted RBP7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ZNF518BQ9C0D4 1074 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 DNAI2Q9GZS0 605 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 FBRSL1Q9HCM7 1045 aaKnown RBP7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 OPTCQ9UBM4 332 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 NARFQ9UHQ1 456 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 MID2Q9UJV3 735 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 ANAPC2Q9UJX6 822 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 FBXO5Q9UKT4 447 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 SNX6Q9UNH7 406 aa7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 WBP11Q9Y2W2 641 aaKnown RBP7.72□□□□□ -1.17
NEDD4L-229ENST00000590506 PABPN1LA6NDY0 278 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CCDC154A6NI56 674 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 FADS2P1A8MWK0 482 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 SLC1A7O00341 560 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CTDSP2O14595 271 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 XPNPEP2O43895 674 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 GAS2O43903 313 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 SEMA3DO95025 777 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 RBP1P09455 135 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TGM2P21980 687 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 BDNFP23560 247 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 YWHAQP27348 245 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 NUDT1P36639 197 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 SERPINH1P50454 418 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ALDH3A2P51648 485 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 GABARAPL2P60520 117 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 GBE1Q04446 702 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ORC1Q13415 861 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 DAG1Q14118 895 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CA9Q16790 459 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TYSND1Q2T9J0 566 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CDC42EP5Q6NZY7 148 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 HACD2Q6Y1H2 254 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 RBM23Q86U06 439 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CDKL3Q8IVW4 592 aaPredicted RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 NETO2Q8NC67 525 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ZNF669Q96BR6 464 aaPredicted RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 RNF170Q96K19 258 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ZBTB45Q96K62 511 aaPredicted RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 RNF145Q96MT1 663 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TSNARE1Q96NA8 513 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 PSKH2Q96QS6 385 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 GDF15Q99988 308 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ZSCAN5AQ9BUG6 496 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ACAT2Q9BWD1 397 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 PRRG3Q9BZD7 231 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 EHMT1Q9H9B1 1298 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 CISHQ9NSE2 258 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ACOXLQ9NUZ1 547 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ASNSD1Q9NWL6 643 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 NPAP1Q9NZP6 1156 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 MAP10Q9P2G4 905 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ERVK-18Q9QC07 812 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ZMAT5Q9UDW3 170 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ZNF639Q9UID6 485 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 ATP6AP2A0A1C7CYW4 349 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TCRBV5S2A0A599 114 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TRIM77I1YAP6 450 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 POLRMTO00411 1230 aaKnown RBP7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 SHOXO15266 292 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 PRPSAP2O60256 369 aa7.71□□□□□ -1.18
NEDD4L-229ENST00000590506 TBC1D4O60343 1298 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms