RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ARRDC2Q8TBH0 407 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 SCRN2Q96FV2 425 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 FERMT1Q9BQL6 677 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 TDRD1Q9BXT4 1180 aaKnown RBP10.38□□□□□ -0.75
SDF2-208ENST00000589788 OSBPL8Q9BZF1 889 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 PCDH9Q9HC56 1237 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 FTSJ1Q9UET6 329 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 GUCA1BQ9UMX6 200 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 APOBEC2Q9Y235 224 aaKnown RBP10.38□□□□□ -0.75
SDF2-208ENST00000589788 CHKBQ9Y259 395 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 EFR3BQ9Y2G0 817 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 NPIPB15A6NHN6 443 aaPredicted RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 HACD1B0YJ81 288 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 H7C0C1 242 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 APOC4-APOC2K7ER74 178 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 TNFSF14O43557 240 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ZNF500O60304 480 aaPredicted RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 MAN1A2O60476 641 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 HEXIM1O94992 359 aaKnown RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 TJP3O95049 919 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 LDOC1O95751 146 aaPredicted RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 APOC2P02655 101 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 PCCBP05166 539 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 PDHA1P08559 390 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ALPIP09923 528 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 HTR1BP28222 390 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ATP5OP48047 213 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 PEX5P50542 639 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 RPL26P61254 145 aaKnown RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 HNRNPKP61978 463 aaKnown RBP eCLIP10.37□□□□□ -0.75
SDF2-208ENST00000589788 ADCY2Q08462 1091 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 MTM1Q13496 603 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 UBAP2LQ14157 1087 aaKnown RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 INPP5AQ14642 412 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 CNGA3Q16281 694 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 TEX44Q53QW1 395 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ZNF542PQ5EBM4 170 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 SAMD5Q5TGI4 173 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 KDM7AQ6ZMT4 941 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 MACC1Q6ZN28 852 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 GLRX5Q86SX6 157 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 CNTD1Q8N815 330 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 LPCAT1Q8NF37 534 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ATL2Q8NHH9 583 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 PIH1D2Q8WWB5 315 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ALG3Q92685 438 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 NUS1Q96E22 293 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 ADGRE3Q9BY15 652 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 GPR27Q9NS67 375 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 KCTD5Q9NXV2 234 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 DNPEPQ9ULA0 475 aa10.37□□□□□ -0.75
SDF2-208ENST00000589788 PACSIN2Q9UNF0 486 aaPredicted RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 RPL26L1Q9UNX3 145 aaKnown RBP10.37□□□□□ -0.75
SDF2-208ENST00000589788 NCOR2Q9Y618 2525 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 A0A0J9YYE9 177 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 GOLGA6CA6NDK9 693 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 GOLGA6BA6NDN3 693 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 NEMP2A6NFY4 417 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PSMD11O00231 422 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 FFAR2O15552 330 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 KIF5CO60282 957 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PIAS2O75928 621 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 TRBC1P01850 177 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 CSF2P04141 144 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 MMP2P08253 660 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 GOLGA6DP0CG33 693 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 ALPPL2P10696 532 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PYGMP11217 842 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 NME1P15531 152 aaKnown RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 ZNF30P17039 623 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 LHCGRP22888 699 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 DGKAP23743 735 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PTPN3P26045 913 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PTPN7P35236 360 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 HNF1BP35680 557 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 OTUD4Q01804 1114 aaKnown RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 XRCC4Q13426 336 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 IHHQ14623 411 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 PCSK7Q16549 785 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 TPRG1LQ5T0D9 272 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 FAXCQ5TGI0 409 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 CCDC70Q6NSX1 233 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 KANSL1Q7Z3B3 1105 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 HSD11B1LQ7Z5J1 315 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 TSPAN33Q86UF1 283 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 NLRP8Q86W28 1048 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 BAHD1Q8TBE0 780 aaPredicted RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 ACTL9Q8TC94 416 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 BTN2A2Q8WVV5 523 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 HTR3CQ8WXA8 447 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 IMP4Q96G21 291 aaKnown RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 CNDP2Q96KP4 475 aaKnown RBP10.36□□□□□ -0.75
SDF2-208ENST00000589788 TEKT5Q96M29 485 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 COQ10AQ96MF6 247 aa10.36□□□□□ -0.75
SDF2-208ENST00000589788 QKIQ96PU8 341 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms