RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TTC7BQ86TV6 843 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 FJX1Q86VR8 437 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 KCNMB4Q86W47 210 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 HPS6Q86YV9 775 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 CNGA4Q8IV77 575 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 PLPP6Q8IY26 295 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 NXPE1Q8N323 547 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 ATL2Q8NHH9 583 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 ADAMTS17Q8TE56 1095 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 STAMBPL1Q96FJ0 436 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 MRFAP1L1Q96HT8 127 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 HSFY1Q96LI6 401 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 ERGIC2Q96RQ1 377 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
VPS25-204ENST00000589577 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 XPO4Q9C0E2 1151 aaKnown RBP6.08□□□□□ -1.44
VPS25-204ENST00000589577 BRD8Q9H0E9 1235 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 RTN4Q9NQC3 1192 aaKnown RBP6.08□□□□□ -1.44
VPS25-204ENST00000589577 B3GNT3Q9Y2A9 372 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 PCDHGA10Q9Y5H3 936 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 SNX10Q9Y5X0 201 aa6.08□□□□□ -1.44
VPS25-204ENST00000589577 NUP210LQ5VU65 1888 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 SYNJ2BP-COX16A0A087WUM0 186 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 KIAA1324LA8MWY0 1029 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 C21orf140B9A014 251 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 C19orf84I3L1E1 186 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 RNF225M0QZC1 329 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 ZW10O43264 779 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 NDUFA10O95299 355 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 IPO7O95373 1038 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 EML2O95834 649 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 F9P00740 461 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 GM2AP17900 193 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CAPN3P20807 821 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 CDC25BP30305 580 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 SSTR2P30874 369 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CCR1P32246 355 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 TRIM23P36406 574 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 USP8P40818 1118 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 STAT1P42224 750 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 FASLGP48023 281 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 ZNF75DP51815 510 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 ART1P52961 327 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 GSDMDP57764 484 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 BPIFB4P59827 614 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 SH3BP2P78314 561 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 GCNT1Q02742 428 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 LRMPQ12912 555 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CUL2Q13617 745 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 RAPSNQ13702 412 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 ATXN7L2Q5T6C5 722 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 SMYD5Q6GMV2 418 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 RETSATQ6NUM9 610 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 TRIM65Q6PJ69 517 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 SLC30A9Q6PML9 568 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 GDPD4Q6W3E5 623 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CUZD1Q86UP6 607 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 EHBP1Q8NDI1 1231 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 SPDYE1Q8NFV5 336 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 OR2AP1Q8NGE2 309 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 ISG20Q96AZ6 181 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 MED15Q96RN5 788 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 PDCL3Q9H2J4 239 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 SUDS3Q9H7L9 328 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 CARS2Q9HA77 564 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 POPDC2Q9HBU9 364 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 PLCB1Q9NQ66 1216 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 LHX9Q9NQ69 397 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 DLL4Q9NR61 685 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 FAM207AQ9NSI2 230 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 NDFIP2Q9NV92 336 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 DDIT4Q9NX09 232 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 MPP6Q9NZW5 540 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 COX16Q9P0S2 106 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 APEX2Q9UBZ4 518 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 KLHL3Q9UH77 587 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 LUC7L2Q9Y383 392 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 COQ4Q9Y3A0 265 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 PLEKHM1Q9Y4G2 1056 aa6.07□□□□□ -1.44
VPS25-204ENST00000589577 COPG1Q9Y678 874 aaKnown RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 HRNRQ86YZ3 2850 aaPredicted RBP6.07□□□□□ -1.44
VPS25-204ENST00000589577 DOCK10Q96BY6 2186 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 IGLV3-10A0A075B6K4 115 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 SSU72P8A0A1W2PR75 194 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 FAM221AA4D161 298 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 A6NL46 340 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 DRGXA6NNA5 263 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 F5H423 210 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 CACNB4O00305 520 aaPredicted RBP6.06□□□□□ -1.44
VPS25-204ENST00000589577 ZNF185O15231 689 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 KCNN4O15554 427 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 GSRP00390 522 aa6.06□□□□□ -1.44
VPS25-204ENST00000589577 CEACAM5P06731 702 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms