RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ORAI3Q9BRQ5 295 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 ZSCAN5AQ9BUG6 496 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 ANKZF1Q9H8Y5 726 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 EBF2Q9HAK2 575 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 BPIFA1Q9NP55 256 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 COQ6Q9Y2Z9 468 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 ABCA7Q8IZY2 2146 aa12.13□□□□□ -0.47
DNMT1-218ENST00000589294 FPGTO14772 594 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 USP1O94782 785 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 HOXC4P09017 264 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 TSHRP16473 764 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PGAM1P18669 254 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PAMP19021 973 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 HOXD12P35452 270 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 TRIM23P36406 574 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 SPAM1P38567 509 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 ELK3P41970 407 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PTGER3P43115 390 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 DHPSP49366 369 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 RACK1P63244 317 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PDIA2Q13087 525 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 MTM1Q13496 603 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PTPRCAPQ14761 206 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 STAT4Q14765 748 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 ANKRD20A4Q4UJ75 823 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 HENMT1Q5T8I9 393 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 LYSMD4Q5XG99 296 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 ESRP1Q6NXG1 681 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PNCKQ6P2M8 343 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 IQCHQ86VS3 1027 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 DCP2Q8IU60 420 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 RELL1Q8IUW5 271 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 AGGF1Q8N302 714 aaeCLIP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 TRAM1L1Q8N609 369 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 TMEM145Q8NBT3 493 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 OR13J1Q8NGT2 312 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 PYROXD1Q8WU10 500 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 SCAMP4Q969E2 229 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 DNAJC1Q96KC8 554 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 ZNF778Q96MU6 729 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 FMO2Q99518 471 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 RIOK2Q9BVS4 552 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 MBNL1Q9NR56 388 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 TREX1Q9NSU2 369 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 EIF2B4Q9UI10 523 aaKnown RBP12.12□□□□□ -0.47
DNMT1-218ENST00000589294 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 WDFY4Q6ZS81 3184 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
DNMT1-218ENST00000589294 GLYATL1P3A0A0U1RQE8 302 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 RAD51BO15315 384 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SLC4A1P02730 911 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 GSTA2P09210 222 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 GNSP15586 552 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 NMBRP28336 390 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ECHS1P30084 290 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 MAGEA4P43358 317 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 YPEL5P62699 121 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 XIAPP98170 497 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 OVGP1Q12889 678 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 FRG1Q14331 258 aaKnown RBP12.11□□□□□ -0.47
DNMT1-218ENST00000589294 INPP5AQ14642 412 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 GPR33Q49SQ1 333 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SPANXN3Q5MJ09 141 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ADAMTSL4Q6UY14 1074 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 RABEPKQ7Z6M1 372 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ABI3BPQ7Z7G0 1075 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SYT12Q8IV01 421 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ZBED8Q8IZ13 594 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 RGL4Q8IZJ4 473 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 MFSD2AQ8NA29 543 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 OR13C4Q8NGS5 318 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ZNF398Q8TD17 642 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SNX19Q92543 992 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 HDAC10Q969S8 669 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SKA1Q96BD8 255 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 MFSD3Q96ES6 412 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 BMFQ96LC9 184 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 TBATAQ96M53 351 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SAYSD1Q9NPB0 183 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
DNMT1-218ENST00000589294 SUSD2Q9UGT4 822 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 CD84Q9UIB8 345 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 NFU1Q9UMS0 254 aa12.11□□□□□ -0.47
DNMT1-218ENST00000589294 RPS6KL1Q9Y6S9 549 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms