RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PDP2Q9P2J9 529 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 MYO6Q9UM54 1294 aa18.36■□□□□ 0.53
CCDC43-204ENST00000588687 FZD6O60353 706 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 FASLGP48023 281 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 MAXP61244 160 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 IHHQ14623 411 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 RAET1GQ6H3X3 334 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 ADAMTSL4Q6UY14 1074 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PAF1Q8N7H5 531 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 AGBL5Q8NDL9 886 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PDCD6IPQ8WUM4 868 aaKnown RBP18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PIH1D2Q8WWB5 315 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 ART4Q93070 314 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 SMIM14Q96QK8 99 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 SPRY4Q9C004 299 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 CDH19Q9H159 772 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 ADNPQ9H2P0 1102 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PHTF1Q9UMS5 762 aa18.35■□□□□ 0.53
CCDC43-204ENST00000588687 PCYT1BQ9Y5K3 369 aaPredicted RBP18.35■□□□□ 0.53
CCDC43-204ENST00000588687 USP9XQ93008 2570 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-204ENST00000588687 RNF8O76064 485 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 EML2O95834 649 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 MPSTP25325 297 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 PCK1P35558 622 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ACTR1BP42025 376 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ATP1A2P50993 1020 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ACTR1AP61163 376 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 SMTNL2Q2TAL5 461 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 RALGPS1Q5JS13 557 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ZNF571Q7Z3V5 609 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-204ENST00000588687 TRIM74Q86UV6 250 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ANKRD20A12PQ8NF67 263 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 CSPG4P5Q96PW8 444 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 OR2M4Q96R27 311 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 ZWILCHQ9H900 591 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 OCIAD1Q9NX40 245 aa18.34■□□□□ 0.53
CCDC43-204ENST00000588687 LRRC53A6NM62 1247 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 B4E171 279 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCDC43-204ENST00000588687 PDHA1P08559 390 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 CCDC172P0C7W6 258 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 CYP2A6P11509 494 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-204ENST00000588687 AMPD1P23109 780 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 TSPAN7P41732 249 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 TLE1Q04724 770 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 PYCR3Q53H96 274 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-204ENST00000588687 LRRC66Q68CR7 880 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 TXNRD3NBQ6F5E7 133 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 BORAQ6PGQ7 559 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 DOK6Q6PKX4 331 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 SFRP1Q8N474 314 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 SLC37A2Q8TED4 501 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 COX14Q96I36 57 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 AGAP2Q99490 1192 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 ABCG8Q9H221 673 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 CNOT8Q9UFF9 292 aaKnown RBP18.33■□□□□ 0.52
CCDC43-204ENST00000588687 CD84Q9UIB8 345 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 PILRAQ9UKJ1 303 aa18.33■□□□□ 0.52
CCDC43-204ENST00000588687 USP9YO00507 2555 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-204ENST00000588687 H3BRJ5 948 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-204ENST00000588687 GZMAP12544 262 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 CTPS1P17812 591 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 PRKCIP41743 596 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 MMP13P45452 471 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 POLE2P56282 527 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 GPLD1P80108 840 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 COLEC12Q5KU26 742 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 ALG1LQ6GMV1 187 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 TMEM71Q6P5X7 295 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 TMCO3Q6UWJ1 677 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 USP45Q70EL2 814 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF765Q7L2R6 523 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF761Q86XN6 746 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-204ENST00000588687 TEX26Q8N6G2 289 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF564Q8TBZ8 553 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-204ENST00000588687 SCAMP4Q969E2 229 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 ZNF653Q96CK0 615 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 HAUS4Q9H6D7 363 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC43-204ENST00000588687 KCNK4Q9NYG8 393 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 TUBD1Q9UJT1 453 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 TMEM98Q9Y2Y6 226 aa18.32■□□□□ 0.52
CCDC43-204ENST00000588687 UTP20O75691 2785 aaKnown RBP18.31■□□□□ 0.52
CCDC43-204ENST00000588687 A6NCN8 305 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 GOLGA6CA6NDK9 693 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 GOLGA6BA6NDN3 693 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 ZW10O43264 779 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 RAD1O60671 282 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 GOLGA6DP0CG33 693 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 CSTF2P33240 577 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCDC43-204ENST00000588687 GPR1P46091 355 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 CDH6P55285 790 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 PTSQ03393 145 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 KCNAB2Q13303 367 aa18.31■□□□□ 0.52
CCDC43-204ENST00000588687 STX1AQ16623 288 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms