RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FLRT2O43155 660 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 SDC3O75056 442 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 CBFA2T3O75081 653 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 PIAS2O75928 621 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 AP2A1O95782 977 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 SLC4A1P02730 911 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 TCP1P17987 556 aaKnown RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 RPL22P35268 128 aaKnown RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 SUZ12Q15022 739 aaKnown RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 CYP1B1Q16678 543 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 HENMT1Q5T8I9 393 aaKnown RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 KCTD16Q68DU8 428 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 ENPP7Q6UWV6 458 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 HEATR4Q86WZ0 1026 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 PDCD7Q8N8D1 485 aaKnown RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 CCDC89Q8N998 374 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 GPR26Q8NDV2 337 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 DEFB124Q8NES8 71 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 BLOC1S5Q8TDH9 187 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 WDR92Q96MX6 357 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 NAP1L3Q99457 506 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 TCEAL2Q9H3H9 227 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 FAM83DQ9H4H8 585 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 ETNK1Q9HBU6 452 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 UCKL1Q9NWZ5 548 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 HACD3Q9P035 362 aa20.13■□□□□ 0.81
DDX39A-207ENST00000588542 NFKBIL1Q9UBC1 381 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-207ENST00000588542 CACNA1AO00555 2505 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 GOLGA6CA6NDK9 693 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 GOLGA6BA6NDN3 693 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 CACNB4O00305 520 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 GOLGA6DP0CG33 693 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 BPIP17213 487 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 DGKAP23743 735 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 HTR1BP28222 390 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 HMGCLP35914 325 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 FDFT1P37268 417 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 GPR1P46091 355 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 HNRNPKP61978 463 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 KCTD19Q17RG1 926 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 ALG11Q2TAA5 492 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 ADAMTSL4Q6UY14 1074 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 RBFAQ8N0V3 343 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 SLC25A45Q8N413 288 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 BAHD1Q8TBE0 780 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 SETD7Q8WTS6 366 aaKnown RBP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 TSACCQ96A04 125 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-207ENST00000588542 LRRC40Q9H9A6 602 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 PAK5Q9P286 719 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 PCOLCE2Q9UKZ9 415 aa20.12■□□□□ 0.81
DDX39A-207ENST00000588542 CTAGE9A4FU28 777 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 GIPC1O14908 333 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 PSMD3O43242 534 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 KCNK5O95279 499 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 MYCLP1P12525 358 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-207ENST00000588542 JUNDP17535 347 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 DCDC1P59894 354 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 CDK3Q00526 305 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 SEMA5AQ13591 1074 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 GLT6D1Q7Z4J2 308 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 PHACTR4Q8IZ21 702 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 ATL2Q8NHH9 583 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 OR1E3Q8WZA6 343 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 MAGOHBQ96A72 148 aaKnown RBP20.11■□□□□ 0.81
DDX39A-207ENST00000588542 FGF22Q9HCT0 170 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 BPIFA1Q9NP55 256 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 RAB6BQ9NRW1 208 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 PHPT1Q9NRX4 125 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-207ENST00000588542 IL17CQ9P0M4 197 aa20.11■□□□□ 0.81
DDX39A-207ENST00000588542 CNOT6Q9ULM6 557 aaKnown RBP20.11■□□□□ 0.81
DDX39A-207ENST00000588542 ZFC3H1O60293 1989 aaKnown RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 FADS2P1A8MWK0 482 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 PYGLP06737 847 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 GIMD1P0DJR0 217 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 ACTN2P35609 894 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 COILP38432 576 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 GRK6P43250 576 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 SRP54P61011 504 aaKnown RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 PPARDQ03181 441 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 GSTA5Q7RTV2 222 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 CREG2Q8IUH2 290 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 ZNF548Q8NEK5 533 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 OR56A4Q8NGH8 313 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 RHBDD1Q8TEB9 315 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 PDXPQ96GD0 296 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 COX14Q96I36 57 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 FRMD8Q9BZ67 464 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 MRPL40Q9NQ50 206 aaKnown RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 KLQ9UEF7 1012 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 APOBEC3BQ9UH17 382 aaKnown RBP20.1■□□□□ 0.81
DDX39A-207ENST00000588542 SAR1BQ9Y6B6 198 aa20.1■□□□□ 0.81
DDX39A-207ENST00000588542 ERI2A8K979 691 aaKnown RBP20.09■□□□□ 0.81
DDX39A-207ENST00000588542 H3BM21 787 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 TNFRSF10CO14798 259 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 BUD23O43709 281 aaKnown RBP20.09■□□□□ 0.81
DDX39A-207ENST00000588542 PHF2O75151 1096 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 SUN1O94901 812 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 FUCA1P04066 466 aa20.09■□□□□ 0.81
DDX39A-207ENST00000588542 CEACAM5P06731 702 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms