RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 RAD51BO15315 384 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 YKT6O15498 198 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 RAD51CO43502 376 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 LDB2O43679 373 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 CFIP05156 583 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 BPIP17213 487 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 TPH1P17752 444 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 GM2AP17900 193 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 PPARGP37231 505 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 RXRGP48443 463 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 ARRB1P49407 418 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 CSNK1EP49674 416 aaKnown RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 THOP1P52888 689 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 ATXN3P54252 364 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 CLDN2P57739 230 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 NXPH1P58417 271 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 CBLBQ13191 982 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 POU6F1Q14863 301 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 IRF4Q15306 451 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 GPR33Q49SQ1 333 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 LYPLAL1Q5VWZ2 237 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 IZUMO3Q5VZ72 239 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 DUPD1Q68J44 220 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 RAET1GQ6H3X3 334 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 HIBCHQ6NVY1 386 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 GCNT7Q6ZNI0 430 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 OR4K2Q8NGD2 314 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 HEXDCQ8WVB3 486 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 BTN2A2Q8WVV5 523 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 EID2BQ96D98 161 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SGSM3Q96HU1 749 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 HIC2Q96JB3 615 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SERPINB12Q96P63 405 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 VPS35Q96QK1 796 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SMIM14Q96QK8 99 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 TTC1Q99614 292 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 HINFPQ9BQA5 517 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 RIOK2Q9BVS4 552 aaKnown RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SPATA16Q9BXB7 569 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 FOXP3Q9BZS1 431 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 WDR26Q9H7D7 661 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 MRM3Q9HC36 420 aaKnown RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 IL26Q9NPH9 171 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 MBNL1Q9NR56 388 aaKnown RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SEMA4GQ9NTN9 838 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 NLE1Q9NVX2 485 aaPredicted RBP9.03□□□□□ -0.96
CIRBP-218ENST00000588344 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 TCAF1Q9Y4C2 921 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 ARL5AQ9Y689 179 aa9.03□□□□□ -0.96
CIRBP-218ENST00000588344 FAM237BA0A1B0GVD1 139 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 TCRBV7S3A2A0A539 114 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 GPR89AB7ZAQ6 455 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SEC31AO94979 1220 aaKnown RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 TTC4O95801 387 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CER1O95813 267 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 PCCBP05166 539 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 GPR89BP0CG08 455 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 PAMP19021 973 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 IGFALSP35858 605 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 GRIA1P42261 906 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF140P52738 457 aaPredicted RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 ARL4CP56559 192 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SESN2P58004 480 aaPredicted RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 KIAA1024LP59773 190 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 IRX4P78413 519 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SLC14A1Q13336 389 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 OLIG2Q13516 323 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SEPT6Q14141 434 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 NFATC4Q14934 902 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 PTPRRQ15256 657 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CERCAMQ5T4B2 595 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 TSTD2Q5T7W7 516 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CERS6Q6ZMG9 384 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 MACC1Q6ZN28 852 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 PTAR1Q7Z6K3 402 aaPredicted RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SDR16C5Q8N3Y7 309 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 GPR26Q8NDV2 337 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 OR13H1Q8NG92 308 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 GABPB2Q8TAK5 448 aaPredicted RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SEC14L1Q92503 715 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 ULK4Q96C45 1275 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 FAM122AQ96E09 287 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CDKN2AIPNLQ96HQ2 116 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 TBATAQ96M53 351 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 LRRC1Q9BTT6 524 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 CARD6Q9BX69 1037 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
CIRBP-218ENST00000588344 RMI1Q9H9A7 625 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 TRIM39Q9HCM9 518 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 BPIFA1Q9NP55 256 aa9.02□□□□□ -0.97
CIRBP-218ENST00000588344 FZD3Q9NPG1 666 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms