RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LRRK1Q38SD2 2015 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 A0A0J9YYE9 177 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 ERVH48-1M5A8F1 160 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 NUDT21O43809 227 aaKnown RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 PRLP01236 227 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 TRBC1P01850 177 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 H2AFZP0C0S5 128 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 JMJD7P0C870 316 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 ALDH4A1P30038 563 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 ETV5P41161 510 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 EPHB1P54762 984 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 DPTQ07507 201 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 EIF3IQ13347 325 aaKnown RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 TGIF1Q15583 401 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 IFI16Q16666 785 aaKnown RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 ZFYVE27Q5T4F4 411 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 PHF19Q5T6S3 580 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 KIAA1614Q5VZ46 1190 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 ALG1LQ6GMV1 187 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 TIGD7Q6NT04 549 aaPredicted RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 USP53Q70EK8 1073 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 H2AFVQ71UI9 128 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 C17orf82Q86X59 251 aaPredicted RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 SLITRK4Q8IW52 837 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 ZNF843Q8N446 348 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 LSM14AQ8ND56 463 aaKnown RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 ARRDC2Q8TBH0 407 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 RAPGEF5Q92565 580 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 TSGA13Q96PP4 275 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
VMP1-206ENST00000587945 UVRAGQ9P2Y5 699 aa14.29□□□□□ -0.12
VMP1-206ENST00000587945 RHPN2P1A8MT19 583 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 K7ENP7 123 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 INPP4BO15327 924 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 EFSO43281 561 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 CLDN7O95471 211 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 IVLP07476 585 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 KRT10P13645 584 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 CCNCP24863 283 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 TEAD1P28347 426 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
VMP1-206ENST00000587945 STC1P52823 247 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 RHDQ02161 417 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 SRSF6Q13247 344 aaKnown RBP14.28□□□□□ -0.12
VMP1-206ENST00000587945 PDK2Q15119 407 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 SLC18A3Q16572 532 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 MAP9Q49MG5 647 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 INO80CQ6PI98 192 aaPredicted RBP14.28□□□□□ -0.12
VMP1-206ENST00000587945 ADAMTSL4Q6UY14 1074 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 LPCAT1Q8NF37 534 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 NUDT22Q9BRQ3 303 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 RIOK2Q9BVS4 552 aaKnown RBP14.28□□□□□ -0.12
VMP1-206ENST00000587945 TDRD1Q9BXT4 1180 aaKnown RBP14.28□□□□□ -0.12
VMP1-206ENST00000587945 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 PCDHGA7Q9Y5G6 932 aa14.28□□□□□ -0.12
VMP1-206ENST00000587945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.28□□□□□ -0.12
VMP1-206ENST00000587945 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 CAPN8A6NHC0 703 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 KCNK1O00180 336 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 JCHAINP01591 159 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 KRT7P08729 469 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 KDELR1P24390 212 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 ACTR1BP42025 376 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 MAPK10P53779 464 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 ACTR1AP61163 376 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 CFHR1Q03591 330 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 BIRC2Q13490 618 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 LY6DQ14210 128 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 MESDQ14696 234 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 C16orf72Q14CZ0 275 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 ASTE1Q2TB18 679 aaPredicted RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 CCDC81Q6ZN84 652 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 ZNF438Q7Z4V0 828 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 CCDC13Q8IYE1 715 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 NAGSQ8N159 534 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 SNRNP27Q8WVK2 155 aaKnown RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 TTC9Q92623 222 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 USP7Q93009 1102 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 FATE1Q969F0 183 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 SCARF2Q96GP6 870 aaPredicted RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 OR2M4Q96R27 311 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 CCNL2Q96S94 520 aaPredicted RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 PCDH9Q9HC56 1237 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 FOXJ2Q9P0K8 574 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
VMP1-206ENST00000587945 PCYT1BQ9Y5K3 369 aaPredicted RBP14.27□□□□□ -0.13
VMP1-206ENST00000587945 LRP4O75096 1905 aa14.26□□□□□ -0.13
VMP1-206ENST00000587945 PRAMEF33A0A0G2JMD5 474 aa14.26□□□□□ -0.13
VMP1-206ENST00000587945 PPM1DO15297 605 aa14.26□□□□□ -0.13
VMP1-206ENST00000587945 PRAMEF10O60809 474 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms