RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 TRIB3Q96RU7 358 aa18.51■□□□□ 0.55
RETREG3-205ENST00000586870 FBXO10Q9UK96 956 aa18.51■□□□□ 0.55
RETREG3-205ENST00000586870 ACOT9Q9Y305 439 aa18.51■□□□□ 0.55
RETREG3-205ENST00000586870 A0A087X1B8 175 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 GFRA2O00451 464 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 H2AFYO75367 372 aaKnown RBP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 RASSF9O75901 435 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 GLDCP23378 1020 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 TIE1P35590 1138 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 NSUN2Q08J23 767 aaKnown RBP eCLIP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 TTC31Q49AM3 519 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 MTDHQ86UE4 582 aaKnown RBP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 SPEM1Q8N4L4 309 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 UCMAQ8WVF2 138 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 SKA1Q96BD8 255 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 KLHL29Q96CT2 875 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 C20orf27Q9GZN8 174 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 MUC3BQ9H195 1237 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 ZNF395Q9H8N7 513 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-205ENST00000586870 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 SLC27A6Q9Y2P4 619 aa18.5■□□□□ 0.55
RETREG3-205ENST00000586870 G3V2L1 256 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 CBX4O00257 560 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 HNRNPCL1O60812 293 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 GJB3O75712 270 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 HAUS5O94927 633 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 LUC7L3O95232 432 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SLC35E2BP0CK96 405 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SAT1P21673 171 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 GMPRP36959 345 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 CXCL12P48061 93 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 CCR3P51677 355 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SLC12A2P55011 1212 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 PRAMEP78395 509 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 MRPS21P82921 87 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ZBTB16Q05516 673 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 MESP2Q0VG99 397 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SDE2Q6IQ49 451 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ASRGL1Q7L266 308 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 WDR75Q8IWA0 830 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 PPP4R1Q8TF05 950 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 HDAC10Q969S8 669 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ELMO2Q96JJ3 720 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 NUDCD1Q96RS6 583 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 CIPCQ9C0C6 399 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 WWP1Q9H0M0 922 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 FAM96AQ9H5X1 160 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SCUBE2Q9NQ36 999 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ABCB8Q9NUT2 735 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 RUVBL2Q9Y230 463 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ACTL7AQ9Y615 435 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 TMEM114B3SHH9 223 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 PHGDHO43175 533 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 GALR2O43603 387 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 NQO1P15559 274 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 COL9A1P20849 921 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 TAS2R39P59534 338 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ABCE1P61221 599 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 E2F5Q15329 346 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 TSNAXIP1Q2TAA8 658 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 INO80DQ53TQ3 878 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 CLNKQ7Z7G1 428 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 PHTF2Q8N3S3 785 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ZNF513Q8N8E2 541 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 FIBINQ8TAL6 211 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 PIWIL2Q8TC59 973 aaKnown RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 STYXQ8WUJ0 223 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 EZH1Q92800 747 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 ACDQ96AP0 544 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 TSPAN17Q96FV3 270 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 FBXO6Q9NRD1 293 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 KIAA1522Q9P206 1035 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-205ENST00000586870 SLC8A2Q9UPR5 921 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 TRIOO75962 3097 aa18.49■□□□□ 0.55
RETREG3-205ENST00000586870 COL4A2P08572 1712 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 KIF26AQ9ULI4 1882 aaPredicted RBP18.48■□□□□ 0.55
RETREG3-205ENST00000586870 ITM2AO43736 263 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 TRIM13O60858 407 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 RPP40O75818 363 aaKnown RBP18.48■□□□□ 0.55
RETREG3-205ENST00000586870 CRTAMO95727 393 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 PABPC1P11940 636 aaKnown RBP18.48■□□□□ 0.55
RETREG3-205ENST00000586870 RGRP47804 291 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 RASSF2P50749 326 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 SCNN1BP51168 640 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 KPNA2P52292 529 aaKnown RBP18.48■□□□□ 0.55
RETREG3-205ENST00000586870 ARF5P84085 180 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 ITGA9Q13797 1035 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 GALNT3Q14435 633 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 GEN1Q17RS7 908 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 FBXW10Q5XX13 1052 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 FAM91A1Q658Y4 838 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 CNSTQ6PJW8 725 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 ZYG11AQ6WRX3 759 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 TRMT11Q7Z4G4 463 aaKnown RBP18.48■□□□□ 0.55
RETREG3-205ENST00000586870 CILP2Q8IUL8 1156 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 SFTPA1Q8IWL2 248 aa18.48■□□□□ 0.55
RETREG3-205ENST00000586870 GPATCH11Q8N954 259 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms