RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 LRMDAQ9H2I8 198 aa29.73■■■□□ 2.35
H3F3B-203ENST00000586518 POMKQ9H5K3 350 aa29.73■■■□□ 2.35
H3F3B-203ENST00000586518 LNPEPQ9UIQ6 1025 aa29.73■■■□□ 2.35
H3F3B-203ENST00000586518 C1orf232A0A0U1RR37 186 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 CAPN8A6NHC0 703 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 PKMP14618 531 aaKnown RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 CD9P21926 228 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 CALB2P22676 271 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 STK19P49842 368 aaPredicted RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 RPL14P50914 215 aaKnown RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 PEX6Q13608 980 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 LYPLAL1Q5VWZ2 237 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 UGT3A1Q6NUS8 523 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 ALYREFQ86V81 257 aaKnown RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 AFAP1L2Q8N4X5 818 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.72■■■□□ 2.353e-17■■□□□ 13.1
H3F3B-203ENST00000586518 SGF29Q96ES7 293 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 ZSWIM3Q96MP5 696 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 UNKQ9C0B0 810 aaKnown RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 EML4Q9HC35 981 aaKnown RBP29.72■■■□□ 2.35
H3F3B-203ENST00000586518 WNT6Q9Y6F9 365 aa29.72■■■□□ 2.35
H3F3B-203ENST00000586518 IPO13O94829 963 aaKnown RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ALPIP09923 528 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 PTPN5P54829 565 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 PTPRNQ16849 979 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 PLPP6Q8IY26 295 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 NKAPQ8N5F7 415 aaKnown RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ZNF781Q8N8C0 355 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 PNPLA1Q8N8W4 532 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ANKRD49Q8WVL7 239 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 SUV39H2Q9H5I1 410 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ZNF37AP17032 561 aaPredicted RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ADARP55265 1226 aaKnown RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 ATP6V0D1P61421 351 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 CTC1Q2NKJ3 1217 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 C9orf50Q5SZB4 431 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 USP45Q70EL2 814 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 TMEM237Q96Q45 408 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 NMUR2Q9GZQ4 415 aa29.71■■■□□ 2.35
H3F3B-203ENST00000586518 TFB2MQ9H5Q4 396 aaKnown RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 FNDC3AQ9Y2H6 1198 aaKnown RBP29.71■■■□□ 2.35
H3F3B-203ENST00000586518 BNIP3LO60238 219 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 CBX6O95503 412 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 ESR1P03372 595 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 PRSS56P0CW18 603 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 TPBGLP0DKB5 382 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 ESRRAP11474 423 aaPredicted RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 PTPN4P29074 926 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 ARRB2P32121 409 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 HNF1BP35680 557 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 IDH3AP50213 366 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 POLR2LP62875 67 aaKnown RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 ARL13AQ5H913 290 aaPredicted RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 ASTLQ6HA08 431 aaPredicted RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 GRAMD4Q6IC98 578 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 PSAPL1Q6NUJ1 521 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 TRIM67Q6ZTA4 783 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 RAB44Q7Z6P3 723 aaPredicted RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 PIM3Q86V86 326 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 RHEBL1Q8TAI7 183 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 SFXN1Q9H9B4 322 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 DUS2Q9NX74 493 aaKnown RBP29.7■■■□□ 2.34
H3F3B-203ENST00000586518 PCDHB1Q9Y5F3 818 aa29.7■■■□□ 2.34
H3F3B-203ENST00000586518 CCDC189A1A4V9 331 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 T-ENOLP0DO92 83 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 CD1DP15813 335 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 ITGALP20701 1170 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 XIAPP98170 497 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 TTC31Q49AM3 519 aaPredicted RBP29.69■■■□□ 2.34
H3F3B-203ENST00000586518 HSF5Q4G112 596 aaPredicted RBP29.69■■■□□ 2.34
H3F3B-203ENST00000586518 TMEM207Q6UWW9 146 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 CBARPQ8N350 705 aaPredicted RBP29.69■■■□□ 2.34
H3F3B-203ENST00000586518 TXNDC5Q8NBS9 432 aaKnown RBP29.69■■■□□ 2.34
H3F3B-203ENST00000586518 LYSMD1Q96S90 227 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 ALG9Q9H6U8 611 aa29.69■■■□□ 2.34
H3F3B-203ENST00000586518 TRMT6Q9UJA5 497 aaKnown RBP29.69■■■□□ 2.34
H3F3B-203ENST00000586518 DIAPH2O60879 1101 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 RASSF9O75901 435 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 NFKBIAP25963 317 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 GKP32189 559 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 CCNHP51946 323 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ALDH18A1P54886 795 aaKnown RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 CBX2Q14781 532 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 DUSP6Q16828 381 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 SEL1L3Q68CR1 1132 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 KIAA0907Q7Z7F0 614 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ISCA2Q86U28 154 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 EBF4Q9BQW3 602 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 DERL2Q9GZP9 239 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ZDHHC6Q9H6R6 413 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 COG4Q9H9E3 785 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 E5RI56 91 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 HDAC3O15379 428 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ADH1CP00326 375 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ZNF7P17097 686 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 FAM109BQ6ICB4 259 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-203ENST00000586518 EPGNQ6UW88 154 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 TPRG1Q6ZUI0 275 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 SNX20Q7Z614 316 aa29.68■■■□□ 2.34
H3F3B-203ENST00000586518 ADGRD2Q7Z7M1 963 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms