RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 DCLK2Q8N568 766 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ANKS4BQ8N8V4 417 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 OR13J1Q8NGT2 312 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 OR2A12Q8NGT7 310 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GPR150Q8NGU9 434 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GDAP1Q8TB36 358 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PIP4K2CQ8TBX8 421 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TCP10LQ8TDR4 215 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CXorf40AQ8TE69 158 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PPM1EQ8WY54 764 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 RAB7BQ96AH8 199 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ECHDC3Q96DC8 303 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SCRN2Q96FV2 425 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CDKN2AIPNLQ96HQ2 116 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SCYL1Q96KG9 808 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 LMLNQ96KR4 655 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TBATAQ96M53 351 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 MAGEB18Q96M61 343 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ZNF778Q96MU6 729 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PLEKHG4BQ96PX9 1271 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 LYSMD1Q96S90 227 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 AGAP2Q99490 1192 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GPR22Q99680 433 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PHF7Q9BWX1 381 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 SLC13A1Q9BZW2 595 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CLPBQ9H078 707 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 POPDC3Q9HBV1 291 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SYTL2Q9HCH5 934 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GPAMQ9HCL2 828 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FBXO6Q9NRD1 293 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 SMYD2Q9NRG4 433 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 THAP10Q9P2Z0 257 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 DKK3Q9UBP4 350 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SLC2A6Q9UGQ3 507 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SLCO3A1Q9UIG8 710 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FKBPLQ9UIM3 349 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GNPTGQ9UJJ9 305 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ACOT9Q9Y305 439 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PCDHB1Q9Y5F3 818 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SPO11Q9Y5K1 396 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PIAS3Q9Y6X2 628 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ATG2BQ96BY7 2078 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CEP290O15078 2479 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MKI67P46013 3256 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 TRPM6Q9BX84 2022 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 A0A1W2PPM1 405 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TSPAN11A1L157 253 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CCDC162PA2VCL2 907 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 RGSL1A5PLK6 1076 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 C2CD4DB7Z1M9 353 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ANHXE9PGG2 379 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 H0Y858 1186 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MAN2B1O00754 1011 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 NDUFAB1O14561 156 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 BUD23O43709 281 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 UGT1A9O60656 530 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SHOX2O60902 331 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 PIAS1O75925 651 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 RHOBTB1O94844 696 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CLDN7O95471 211 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PRLP01236 227 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ESR1P03372 595 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 S100BP04271 92 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 TROVE2P10155 538 aaKnown RBP eCLIP6.17□□□□□ -1.42
LIG3-206ENST00000586058 ACADMP11310 421 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 HOXB2P14652 356 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 HNRNPLP14866 589 aaKnown RBP eCLIP6.17□□□□□ -1.42
LIG3-206ENST00000586058 GLULP15104 373 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 GKP32189 559 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SLC8A1P32418 973 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 CTHP32929 405 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 LSP1P33241 339 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 HNF1BP35680 557 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 LTBRP36941 435 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PTGER3P43115 390 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SLC6A11P48066 632 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ARCN1P48444 511 aaKnown RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 RGS4P49798 205 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SEC13P55735 322 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 MPP1Q00013 466 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 SLC18A2Q05940 514 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 GTF2H3Q13889 308 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 LRRC32Q14392 662 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ITIH4Q14624 930 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 LRRC14Q15048 493 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ACOX1Q15067 660 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 PTPRNQ16849 979 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 AAK1Q2M2I8 961 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TYSND1Q2T9J0 566 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TTLL9Q3SXZ7 439 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 HSF5Q4G112 596 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 SETMARQ53H47 684 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 EOGTQ5NDL2 527 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 EMC10Q5UCC4 262 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 GKAP1Q5VSY0 366 aaPredicted RBP6.17□□□□□ -1.42
LIG3-206ENST00000586058 LRRC66Q68CR7 880 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 TMEM215Q68D42 235 aa6.17□□□□□ -1.42
LIG3-206ENST00000586058 ZNF776Q68DI1 518 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms