RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ZSCAN32Q9NX65 697 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 NFKBIL1Q9UBC1 381 aaPredicted RBP18.26■□□□□ 0.51
RFFL-211ENST00000584541 SLC2A6Q9UGQ3 507 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 CD84Q9UIB8 345 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 FKBPLQ9UIM3 349 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 MBD1Q9UIS9 605 aaPredicted RBP18.26■□□□□ 0.51
RFFL-211ENST00000584541 FNDC3AQ9Y2H6 1198 aaKnown RBP18.26■□□□□ 0.51
RFFL-211ENST00000584541 FAM169AQ9Y6X4 670 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 THADAQ6YHU6 1953 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 ZDBF2Q9HCK1 2354 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 GLYATL1P3A0A0U1RQE8 302 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 H7C0S8 307 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 SPAG6O75602 509 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 PAK4O96013 591 aaPredicted RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 SP9P0CG40 484 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 TSHRP16473 764 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 PSMA3P25788 255 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 PHBP35232 272 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 PMS2P54278 862 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 CRYMQ14894 314 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 LRRC14Q15048 493 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 BRD3Q15059 726 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 LONRF1Q17RB8 773 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 KIAA0930Q6ICG6 404 aaPredicted RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 UNC5AQ6ZN44 842 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 LPCAT2Q7L5N7 544 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 GPR26Q8NDV2 337 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 OR13J1Q8NGT2 312 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 OR6P1Q8NGX9 317 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 GABPB2Q8TAK5 448 aaPredicted RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 GSDMBQ8TAX9 411 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 SNX19Q92543 992 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 FOXJ1Q92949 421 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 HDAC10Q969S8 669 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 AP2M1Q96CW1 435 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 TBATAQ96M53 351 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 WDR83Q9BRX9 315 aaKnown RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 ABCG8Q9H221 673 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 CDC42EP4Q9H3Q1 356 aaKnown RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 VPS37BQ9H9H4 285 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.25■□□□□ 0.51
RFFL-211ENST00000584541 SLC30A1Q9Y6M5 507 aa18.25■□□□□ 0.51
RFFL-211ENST00000584541 METTL12A8MUP2 240 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 MEI4A8MW99 385 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 SLC31A1O15431 190 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 LATO43561 262 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 PYGLP06737 847 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 GM2AP17900 193 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 MC4RP32245 332 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 PLA2G5P39877 138 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 ITGA9Q13797 1035 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 STEAP4Q687X5 459 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 AFTPHQ6ULP2 937 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 FAM151BQ6UXP7 276 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 CAPN12Q6ZSI9 719 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 RFLNAQ6ZTI6 216 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 C3orf62Q6ZUJ4 267 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 NLRP8Q86W28 1048 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 DENND6BQ8NEG7 585 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 AENQ8WTP8 325 aaKnown RBP18.24■□□□□ 0.51
RFFL-211ENST00000584541 NELL1Q92832 810 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 BIRC7Q96CA5 298 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 FCRL3Q96P31 734 aaPredicted RBP18.24■□□□□ 0.51
RFFL-211ENST00000584541 TRIM56Q9BRZ2 755 aaKnown RBP18.24■□□□□ 0.51
RFFL-211ENST00000584541 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 SPATA16Q9BXB7 569 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 IL26Q9NPH9 171 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 DMTF1Q9Y222 760 aa18.24■□□□□ 0.51
RFFL-211ENST00000584541 ZCWPW2A0A1B0GU75 182 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 CCDC162PA2VCL2 907 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 CCDC151A5D8V7 595 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 CCL22O00626 93 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 SRP72O76094 671 aaKnown RBP18.23■□□□□ 0.51
RFFL-211ENST00000584541 VAPBO95292 243 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 PRAMEF1O95521 474 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 IGHV4-34P06331 123 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 ITGALP20701 1170 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 BCKDHBP21953 392 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 HNRNPA2B1P22626 353 aaKnown RBP18.23■□□□□ 0.51
RFFL-211ENST00000584541 SSTR1P30872 391 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 AKT2P31751 481 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 ARSDP51689 593 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 DPTQ07507 201 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 THOC5Q13769 683 aaKnown RBP18.23■□□□□ 0.51
RFFL-211ENST00000584541 FGL2Q14314 439 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 KYNUQ16719 465 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 SPDYCQ5MJ68 293 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 HENMT1Q5T8I9 393 aaKnown RBP18.23■□□□□ 0.51
RFFL-211ENST00000584541 PDPK2PQ6A1A2 396 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 RAET1GQ6H3X3 334 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 CEP68Q76N32 757 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 TRAM1L1Q8N609 369 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 OR4L1Q8NH43 312 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 DTX3LQ8TDB6 740 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 SCAMP4Q969E2 229 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 CAVIN3Q969G5 261 aa18.23■□□□□ 0.51
RFFL-211ENST00000584541 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.23■□□□□ 0.51
RFFL-211ENST00000584541 LENG8Q96PV6 779 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms