RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 UROC1Q96N76 676 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 KAT8Q9H7Z6 458 aaKnown RBP13.03□□□□□ -0.32
RNF43-208ENST00000584437 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
RNF43-208ENST00000584437 C2orf71A6NGG8 1288 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 ZNF879B4DU55 563 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 SLC30A4O14863 429 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 UGT2B17O75795 530 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 FABP3P05413 133 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 AQP4P55087 323 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 RPL26P61254 145 aaKnown RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 MRPS5P82675 430 aaKnown RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 TRPV3Q8NET8 790 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 TUBGCP5Q96RT8 1024 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 CDT1Q9H211 546 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 EBF3Q9H4W6 596 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 KCNA10Q16322 511 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 CA9Q16790 459 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 SULT1C3Q6IMI6 304 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 PGBD2Q6P3X8 592 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 PRR23BQ6ZRT6 265 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 RNF44Q7L0R7 432 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 OR4A15Q8NGL6 344 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 SPOCK2Q92563 424 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 SKA1Q96BD8 255 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 TTYH1Q9H313 450 aaPredicted RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 GLOD4Q9HC38 313 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 TRPV5Q9NQA5 729 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 PLK2Q9NYY3 685 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 RBMX2Q9Y388 322 aaKnown RBP13.02□□□□□ -0.32
RNF43-208ENST00000584437 PCDHB12Q9Y5F1 795 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 TRPV2Q9Y5S1 764 aa13.02□□□□□ -0.32
RNF43-208ENST00000584437 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 METTL18O95568 372 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 WEE1P30291 646 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 LIMK2P53671 638 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 SLC5A3P53794 718 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 CPTPQ5TA50 214 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 RASAL3Q86YV0 1011 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 OR8H1Q8NGG4 311 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 GPATCH1Q9BRR8 931 aaKnown RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 ALG2Q9H553 416 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF43-208ENST00000584437 TRPS1Q9UHF7 1281 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 TRIM17Q9Y577 477 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 A0A0X1KG70 313 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 FAM86C2PA6NEL3 165 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 PLIN3O60664 434 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 MAGP20916 626 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 CCR3P51677 355 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 AP3S2P59780 193 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 RAB2AP61019 212 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 POU5F1Q01860 360 aaKnown RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 LDLRAP1Q5SW96 308 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 SLC26A9Q7LBE3 791 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 OAFQ86UD1 273 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 LRRC52Q8N7C0 313 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 TAMM41Q96BW9 452 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 PPM1MQ96MI6 270 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 ABHD16BQ9H3Z7 469 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 EXD2Q9NVH0 621 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 ZNHIT2Q9UHR6 403 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 POMPQ9Y244 141 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 SPATA31C1P0DKV0 1188 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 ACADMP11310 421 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 SLC25A52Q3SY17 297 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
RNF43-208ENST00000584437 UBR7Q8N806 425 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 GPR156Q8NFN8 814 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 TWIST2Q8WVJ9 160 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 PPP1R16AQ96I34 528 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 CD320Q9NPF0 282 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 ZNF224Q9NZL3 707 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.33
RNF43-208ENST00000584437 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 NDUFS2O75306 463 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ATP6V1G1O75348 118 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 AP2A2O94973 939 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 KIR3DL1P43629 444 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 HADHBP55084 474 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 HECTD2Q5U5R9 776 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ZNF572Q7Z3I7 529 aaPredicted RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 GALNT5Q7Z7M9 940 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
RNF43-208ENST00000584437 LRTOMTQ8WZ04 291 aa13.01□□□□□ -0.33
RNF43-208ENST00000584437 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms