RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 VASH2Q86V25 355 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 RFX6Q8HWS3 928 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 CCDC50Q8IVM0 306 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 LZTR1Q8N653 840 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 PQLC3Q8N755 202 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 OR56A4Q8NGH8 313 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 SCG3Q8WXD2 468 aaKnown RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 ECHDC3Q96DC8 303 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 ZNF641Q96N77 438 aaPredicted RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 RNF157Q96PX1 679 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 TUBGCP5Q96RT8 1024 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 CCNL2Q96S94 520 aaPredicted RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 CINPQ9BW66 212 aaPredicted RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 ATP13A3Q9H7F0 1226 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 SP110Q9HB58 689 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
SKA2-209ENST00000583976 FOXJ2Q9P0K8 574 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 PCDHA3Q9Y5H8 950 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 DGKBQ9Y6T7 804 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 UNC13CQ8NB66 2214 aa15.67■□□□□ 0.1
SKA2-209ENST00000583976 ARHGEF17Q96PE2 2063 aaPredicted RBP15.66■□□□□ 0.1
SKA2-209ENST00000583976 PRAMEF33A0A0G2JMD5 474 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 CYSRT1A8MQ03 144 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 PRAMEF10O60809 474 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 ZRANB2O95218 330 aaKnown RBP eCLIP15.66■□□□□ 0.1
SKA2-209ENST00000583976 MAP3K6O95382 1288 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 ELFN1P0C7U0 828 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 WT1P19544 449 aaPredicted RBP15.66■□□□□ 0.1
SKA2-209ENST00000583976 CTNNA2P26232 953 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 MAZP56270 477 aaKnown RBP15.66■□□□□ 0.1
SKA2-209ENST00000583976 DYNLT1P63172 113 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 C14orf28Q4W4Y0 310 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 NCBP2-AS2Q69YL0 99 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 LIPIQ6XZB0 460 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 SPOCD1Q6ZMY3 1216 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 DPPA4Q7L190 304 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 TAF8Q7Z7C8 310 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 KATNAL2Q8IYT4 538 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 RCOR2Q8IZ40 523 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 FAM46DQ8NEK8 389 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 FAF2Q96CS3 445 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 MED8Q96G25 268 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 STRADBQ9C0K7 418 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 WDR26Q9H7D7 661 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 B4GALT6Q9UBX8 382 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 PYCARDQ9ULZ3 195 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 PCDHGA7Q9Y5G6 932 aa15.66■□□□□ 0.1
SKA2-209ENST00000583976 CCDC66A2RUB6 948 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 B8ZZF3 427 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 CACNB4O00305 520 aaPredicted RBP15.65■□□□□ 0.1
SKA2-209ENST00000583976 TRAFD1O14545 582 aaPredicted RBP15.65■□□□□ 0.1
SKA2-209ENST00000583976 ZSCAN12O43309 604 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 SLC28A2O43868 658 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 MFSD11O43934 449 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 TNFP01375 233 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 JMJD7P0C870 316 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 SERPINB6P35237 376 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 CDKN2BP42772 138 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 RWDD2BP57060 319 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 EIF3IQ13347 325 aaKnown RBP15.65■□□□□ 0.1
SKA2-209ENST00000583976 HLTFQ14527 1009 aaKnown RBP eCLIP15.65■□□□□ 0.1
SKA2-209ENST00000583976 GRM3Q14832 879 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 PTPRRQ15256 657 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 CNGA3Q16281 694 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 MAP9Q49MG5 647 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 SLITRK4Q8IW52 837 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 PAF1Q8N7H5 531 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 ATL2Q8NHH9 583 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 HCAR2Q8TDS4 363 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 ALG3Q92685 438 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 RBM41Q96IZ5 413 aaKnown RBP15.65■□□□□ 0.1
SKA2-209ENST00000583976 TRIM4Q9C037 500 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 CYP4F12Q9HCS2 524 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 MOSPD1Q9UJG1 213 aa15.65■□□□□ 0.1
SKA2-209ENST00000583976 TLN1Q9Y490 2541 aaKnown RBP15.64■□□□□ 0.09
SKA2-209ENST00000583976 PRSS38A1L453 326 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 APOL1O14791 398 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 DDX3YO15523 660 aaKnown RBP15.64■□□□□ 0.09
SKA2-209ENST00000583976 GLB1P16278 677 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 NFKB2Q00653 900 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 GBE1Q04446 702 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 BCL2L1Q07817 233 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 NFATC3Q12968 1075 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 C16orf72Q14CZ0 275 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 ACOX1Q15067 660 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 PAFAH1B3Q15102 231 aaKnown RBP15.64■□□□□ 0.09
SKA2-209ENST00000583976 LINC00303Q3SY05 128 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 AADACL2Q6P093 401 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 NPNTQ6UXI9 565 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 ZFAND4Q86XD8 727 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 REXO1L1PQ8IX06 675 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 UBL4BQ8N7F7 174 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 EXD3Q8N9H8 876 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 LRRN4Q8WUT4 740 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 PMEPA1Q969W9 287 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 TMEM74Q96NL1 305 aa15.64■□□□□ 0.09
SKA2-209ENST00000583976 ALS2CR12Q96Q35 445 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms