RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SDC4P31431 198 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 STAT1P42224 750 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 GPR3P46089 330 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 LIMK2P53671 638 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 KIAA1024LP59773 190 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 TRA2AQ13595 282 aaKnown RBP eCLIP5.34□□□□□ -1.55
VAPA-207ENST00000583879 NR1D2Q14995 579 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 C15orf59Q2T9L4 293 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 AMZ1Q400G9 498 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CCDC14Q49A88 953 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 MAP9Q49MG5 647 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 SPECC1LQ69YQ0 1117 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 DPY19L2P1Q6NXN4 242 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 PNCKQ6P2M8 343 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 BRAT1Q6PJG6 821 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 LIPIQ6XZB0 460 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZNF662Q6ZS27 426 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 STRADAQ7RTN6 431 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZNF438Q7Z4V0 828 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZSWIM9Q86XI8 627 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 DNAAF5Q86Y56 855 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CAMK1DQ8IU85 385 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CACNA2D3Q8IZS8 1091 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 EMC1Q8N766 993 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 RTL3Q8N8U3 475 aaKnown RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 MSANTD4Q8NCY6 345 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 AGBL5Q8NDL9 886 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 KIAA1524Q8TCG1 905 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 NUDT8Q8WV74 236 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 RXFP2Q8WXD0 754 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CPA5Q8WXQ8 436 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CENPIQ92674 756 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 PMEPA1Q969W9 287 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 TBC1D31Q96DN5 1066 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 NUDT22Q9BRQ3 303 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 DDA1Q9BW61 102 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 LGR4Q9BXB1 951 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ASPSCR1Q9BZE9 553 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 KLC2Q9H0B6 622 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 NOL6Q9H6R4 1146 aaKnown RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 LRRC4CQ9HCJ2 640 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CYP4F12Q9HCS2 524 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 FGF22Q9HCT0 170 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZNF71Q9NQZ8 489 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 SLC39A1Q9NY26 324 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 RWDD2AQ9UIY3 292 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 NEU3Q9UQ49 428 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 B3GALT1Q9Y5Z6 326 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 HECTD1Q9ULT8 2610 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 BOD1L1Q8NFC6 3051 aa5.34□□□□□ -1.56
VAPA-207ENST00000583879 TDRD6O60522 2096 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 BLACEA4D250 179 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 C2CD4BA6NLJ0 364 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 WASH4PA8MWX3 477 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 B4E171 279 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 RASA4BC9J798 803 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 RASA4O43374 803 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 RAD1O60671 282 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 ECEL1O95672 775 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 FUCA1P04066 466 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 PRKCGP05129 697 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CEACAM5P06731 702 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 MMEP08473 750 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 EPB42P16452 691 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 MMP8P22894 467 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 MAP4P27816 1152 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 EPHB2P29323 1055 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CSTF2P33240 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
VAPA-207ENST00000583879 DEKP35659 375 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 MMP12P39900 470 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 TSPAN7P41732 249 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 PTPN9P43378 593 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CSNK1DP48730 415 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 MAZP56270 477 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 HDAC4P56524 1084 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 POLR2LP62875 67 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 NOMO3P69849 1222 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 ILF3Q12906 894 aaKnown RBP eCLIP5.33□□□□□ -1.56
VAPA-207ENST00000583879 RALGDSQ12967 914 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 PEX6Q13608 980 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 RAPGEF1Q13905 1077 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CDO1Q16878 200 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 PARP15Q460N3 678 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CFAP58Q5T655 872 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 DCAF12Q5T6F0 453 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 TAF3Q5VWG9 929 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 NKAIN2Q5VXU1 208 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 NAA35Q5VZE5 725 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 AFMIDQ63HM1 303 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 TMEM71Q6P5X7 295 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 PHLDB2Q86SQ0 1253 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 NRROSQ86YC3 692 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 DMRTC2Q8IXT2 367 aaPredicted RBP5.33□□□□□ -1.56
VAPA-207ENST00000583879 NAGSQ8N159 534 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CCDC185Q8N715 623 aa5.33□□□□□ -1.56
VAPA-207ENST00000583879 CCDC112Q8NEF3 446 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms