RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 SUCOQ9UBS9 1254 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 A8MU76 341 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 NME4O00746 187 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 CLASP2O75122 1294 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 SOAT2O75908 522 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 THP07101 528 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 PCSK1P29120 753 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 MTHFRP42898 656 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 DAOAP59103 153 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 UFM1P61960 85 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 RAD51Q06609 339 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 TSNQ15631 228 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 MEP1AQ16819 746 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 PTPRNQ16849 979 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 RAP1GAP2Q684P5 730 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 NANOGNBQ7Z5D8 188 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 CFAP52Q8N1V2 620 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 TMEM102Q8N9M5 508 aaPredicted RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 OR13C4Q8NGS5 318 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 DQX1Q8TE96 717 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 RORBQ92753 470 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 VAT1Q99536 393 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 SACM1LQ9NTJ5 587 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 TRMT6Q9UJA5 497 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 ZNF112Q9UJU3 913 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 NPEPPSL1A6NEC2 478 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 MEIS3P2A8K0S8 358 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 IRF1P10914 325 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 DBTP11182 482 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 IMPDH2P12268 514 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 EFNA1P20827 205 aaPredicted RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 CAPGP40121 348 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 FOXA1P55317 472 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 SLC2A7Q6PXP3 512 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 THEM5Q8N1Q8 247 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 LRRC52Q8N7C0 313 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 NUDT8Q8WV74 236 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 LRRC58Q96CX6 371 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 HIPK3Q9H422 1215 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 TNFRSF12AQ9NP84 129 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 OLAHQ9NV23 265 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 FBXW11Q9UKB1 542 aa10.56□□□□□ -0.72
RNF43-207ENST00000583753 ZNFX1Q9P2E3 1918 aaKnown RBP10.56□□□□□ -0.72
RNF43-207ENST00000583753 KPNA4O00629 521 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 FBP2O00757 339 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ZSCAN9O15535 394 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 RGS5O15539 181 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 MFN2O95140 757 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 LRATO95237 230 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 FCGR1AP12314 374 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ALOX12P18054 663 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 MAGEA3P43357 314 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CLCNKBP51801 687 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 UBE3AQ05086 875 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 LRRC8DQ7L1W4 858 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 PAGE2Q7Z2X7 111 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 SLC15A3Q8IY34 581 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 HS3ST5Q8IZT8 346 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CPSF7Q8N684 471 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 SLC15A4Q8N697 577 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ATG16L2Q8NAA4 619 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ITCHQ96J02 903 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 SNX27Q96L92 541 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 NPY6RQ99463 290 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 RIC8BQ9NVN3 520 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 PLK2Q9NYY3 685 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ARL5AQ9Y689 179 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ZBTB42B2RXF5 422 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 H0Y858 1186 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 SNAP91O60641 907 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 SLC22A3O75751 556 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CNPP09543 421 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 SFSWAPQ12872 951 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 DMC1Q14565 340 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CHERPQ8IWX8 916 aaKnown RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 LPCAT1Q8NF37 534 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CDCA5Q96FF9 252 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 SEPT5Q99719 369 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 GALPQ9UBC7 116 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CIDEBQ9UHD4 219 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.55□□□□□ -0.72
RNF43-207ENST00000583753 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
RNF43-207ENST00000583753 SH3PXD2BA1X283 911 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 J3KR12 359 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 TREHO43280 583 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 OR4F21O95013 312 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 CD247P20963 164 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 PROZP22891 400 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 OR1E1P30953 314 aa10.55□□□□□ -0.72
RNF43-207ENST00000583753 RENBPP51606 427 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms