RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 TEX44Q53QW1 395 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 DOK6Q6PKX4 331 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 NPNTQ6UXI9 565 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 CBARPQ8N350 705 aaPredicted RBP20.06■□□□□ 0.8
SMG8-204ENST00000580498 LRRN4Q8WUT4 740 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 FGF11Q92914 225 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 CCDC74AQ96AQ1 378 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 ZNF578Q96N58 590 aaPredicted RBP20.06■□□□□ 0.8
SMG8-204ENST00000580498 FRMD8Q9BZ67 464 aaPredicted RBP20.06■□□□□ 0.8
SMG8-204ENST00000580498 RBSNQ9H1K0 784 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 POLR1BQ9H9Y6 1135 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 THSD1Q9NS62 852 aa20.06■□□□□ 0.8
SMG8-204ENST00000580498 URB1O60287 2271 aaKnown RBP20.05■□□□□ 0.8
SMG8-204ENST00000580498 HACD1B0YJ81 288 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 BRINP1O60477 761 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 ZNF189O75820 626 aaPredicted RBP20.05■□□□□ 0.8
SMG8-204ENST00000580498 CLDN7O95471 211 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 PNLIPP16233 465 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 ABCG1P45844 678 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 LSSP48449 732 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 PCSK7Q16549 785 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 C14orf28Q4W4Y0 310 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 PERM1Q5SV97 790 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 GALNT13Q8IUC8 556 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 IMP4Q96G21 291 aaKnown RBP20.05■□□□□ 0.8
SMG8-204ENST00000580498 TMEM74Q96NL1 305 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 FAM83DQ9H4H8 585 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 ZFYVE1Q9HBF4 777 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 KLHL8Q9P2G9 620 aaPredicted RBP20.05■□□□□ 0.8
SMG8-204ENST00000580498 SUFUQ9UMX1 484 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 SLC17A4Q9Y2C5 497 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 GPSM3Q9Y4H4 160 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 PCDHB1Q9Y5F3 818 aa20.05■□□□□ 0.8
SMG8-204ENST00000580498 RHPN2P1A8MT19 583 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 CEACAM5P06731 702 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 CDK18Q07002 472 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 EIF3IQ13347 325 aaKnown RBP20.04■□□□□ 0.8
SMG8-204ENST00000580498 LRP8Q14114 963 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 PPP2R5EQ16537 467 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 QPCTQ16769 361 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 TBC1D25Q3MII6 688 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 OGFOD3Q6PK18 319 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 CCNJLQ8IV13 435 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 ARL14Q8N4G2 192 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 GPR156Q8NFN8 814 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 WDR36Q8NI36 951 aaKnown RBP20.04■□□□□ 0.8
SMG8-204ENST00000580498 GPBAR1Q8TDU6 330 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 LRRC45Q96CN5 670 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 HAUS1Q96CS2 278 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 OR2M4Q96R27 311 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 RIOK2Q9BVS4 552 aaKnown RBP20.04■□□□□ 0.8
SMG8-204ENST00000580498 CEP41Q9BYV8 373 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 GPR63Q9BZJ6 419 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 GLOD4Q9HC38 313 aa20.04■□□□□ 0.8
SMG8-204ENST00000580498 AKAP7Q9P0M2 348 aaPredicted RBP20.04■□□□□ 0.8
SMG8-204ENST00000580498 APC2O95996 2303 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 A0A087WV48 116 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 CCDC66A2RUB6 948 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 SOWAHDA6NJG2 315 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 NUDT21O43809 227 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 STK10O94804 968 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 PRLP01236 227 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 MLLT3P42568 568 aaPredicted RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 SPINT3P49223 89 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 PCBP4P57723 403 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 ERVPABLB-1P60509 514 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 GALNT3Q14435 633 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 C3orf38Q5JPI3 329 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 CERCAMQ5T4B2 595 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 CNTD1Q8N815 330 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 SNIP1Q8TAD8 396 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 ZDHHC1Q8WTX9 485 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 HNRNPLLQ8WVV9 542 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 SCAMP4Q969E2 229 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 CCDC97Q96F63 343 aaPredicted RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 BAG1Q99933 345 aaPredicted RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 LRRN3Q9H3W5 708 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 STN1Q9H668 368 aaKnown RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 RMI1Q9H9A7 625 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 MAGEE1Q9HCI5 957 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 VPS18Q9P253 973 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 LRIT1Q9P2V4 623 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 IMPACTQ9P2X3 320 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 FAM153AQ9UHL3 310 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 APPL1Q9UKG1 709 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 ANKRD11Q6UB99 2663 aaPredicted RBP20.03■□□□□ 0.8
SMG8-204ENST00000580498 ASXL3Q9C0F0 2248 aa20.03■□□□□ 0.8
SMG8-204ENST00000580498 RP1P56715 2156 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 hCG_1818297A0A087WSY0 165 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 CCDC187A0A096LP49 1063 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 MACROD2A1Z1Q3 448 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 BTNL10A8MVZ5 291 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 INPP4BO15327 924 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 NDST3O95803 873 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 MPOP05164 745 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 RPLP0P05388 317 aaKnown RBP20.02■□□□□ 0.8
SMG8-204ENST00000580498 MMP2P08253 660 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 SLC2A4P14672 509 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 PTPN3P26045 913 aa20.02■□□□□ 0.8
SMG8-204ENST00000580498 ACTR1BP42025 376 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms