RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 IFI44Q8TCB0 444 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 MAPK15Q8TD08 544 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 OR1E3Q8WZA6 343 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 ALG3Q92685 438 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 GATA6Q92908 595 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 NAT6Q93015 286 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 SCAMP4Q969E2 229 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 TEKT5Q96M29 485 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 ALS2CR12Q96Q35 445 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
NDEL1-208ENST00000580237 LGR4Q9BXB1 951 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 GPR63Q9BZJ6 419 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 MRPL40Q9NQ50 206 aaKnown RBP10.87□□□□□ -0.67
NDEL1-208ENST00000580237 UBP1Q9NZI7 540 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 GULP1Q9UBP9 304 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 FAM153AQ9UHL3 310 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 PNMA8BQ9ULN7 279 aaPredicted RBP10.87□□□□□ -0.67
NDEL1-208ENST00000580237 GUCA1BQ9UMX6 200 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 GPR34Q9UPC5 381 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF711Q9Y462 761 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 CAPN6Q9Y6Q1 641 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 DGKBQ9Y6T7 804 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 ACACAQ13085 2346 aa10.87□□□□□ -0.67
NDEL1-208ENST00000580237 A0A0U1RQJ8 604 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 B4DGG1 531 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TNFRSF10CO14798 259 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 INPP4BO15327 924 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 YY2O15391 372 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 KCNN4O15554 427 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF189O75820 626 aaPredicted RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ASMTLO95671 621 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 NDST3O95803 873 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 PROS1P07225 676 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 GP1BAP07359 652 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 HOXC4P09017 264 aaPredicted RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 PIRTP0C851 137 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 RBP3P10745 1247 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TEAD1P28347 426 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TRIM23P36406 574 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 GNPDA1P46926 289 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 DPTQ07507 201 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 WASHC5Q12768 1159 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ILF3Q12906 894 aaKnown RBP eCLIP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 BIRC2Q13490 618 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 SMAD1Q15797 465 aaKnown RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 SEL1L2Q5TEA6 688 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ALS2CLQ60I27 953 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 AADACL2Q6P093 401 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 GUSBP11Q6P575 273 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 DARS2Q6PI48 645 aaKnown RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 CCNI2Q6ZMN8 369 aaPredicted RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 RFLNAQ6ZTI6 216 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF765Q7L2R6 523 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TECPR1Q7Z6L1 1165 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TRIM74Q86UV6 250 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 SLC35F3Q8IY50 421 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF567Q8N184 647 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 SDR16C5Q8N3Y7 309 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 KYQ8NBH2 561 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 LRRC45Q96CN5 670 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 NXPE2Q96DL1 559 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 LYSMD1Q96S90 227 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 FAM118BQ9BPY3 351 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TEX101Q9BY14 249 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 CLPBQ9H078 707 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 CDH19Q9H159 772 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ABCG8Q9H221 673 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ZFYVE1Q9HBF4 777 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 TRHDEQ9UKU6 1024 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 SHOC2Q9UQ13 582 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 CLCA2Q9UQC9 943 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 EFR3BQ9Y2G0 817 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF106Q9H2Y7 1883 aaKnown RBP10.86□□□□□ -0.67
NDEL1-208ENST00000580237 UNC13CQ8NB66 2214 aa10.86□□□□□ -0.67
NDEL1-208ENST00000580237 ANXA9O76027 345 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 PYGMP11217 842 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 RBL1P28749 1068 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 SPINT3P49223 89 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 WNT3AP56704 352 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 PTSQ03393 145 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 MPP3Q13368 585 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 PRPSAP1Q14558 356 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 ZNF569Q5MCW4 686 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 KCTD16Q68DU8 428 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 LVRNQ6Q4G3 990 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 ADAMTSL4Q6UY14 1074 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 MARK2Q7KZI7 788 aaKnown RBP10.85□□□□□ -0.67
NDEL1-208ENST00000580237 MARCH9Q86YJ5 346 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 SLC25A41Q8N5S1 370 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 RNF10Q8N5U6 811 aaKnown RBP10.85□□□□□ -0.67
NDEL1-208ENST00000580237 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 FAM46DQ8NEK8 389 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 HIC2Q96JB3 615 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 DEPDC7Q96QD5 511 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 OR2M4Q96R27 311 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 TRIB3Q96RU7 358 aa10.85□□□□□ -0.67
NDEL1-208ENST00000580237 SRPK1Q96SB4 655 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms