RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SEPT3Q9UH03 358 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SUN2Q9UH99 717 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 AMACRQ9UHK6 382 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 EVLQ9UI08 416 aaPredicted RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 GGT7Q9UJ14 662 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC25A13Q9UJS0 675 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PPIL1Q9Y3C6 166 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 HEY1Q9Y5J3 304 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 GOLGA4Q13439 2230 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 SPTBN4Q9H254 2564 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PIEZO1Q92508 2521 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CFAP54Q96N23 3096 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 LOC285095A0A1B0GVY8 99 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PP55 124 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 C5orf60A6NFR6 353 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PROB1E7EW31 1015 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 H0Y858 1186 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 WNT9AO14904 365 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PPP1R12AO14974 1030 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC7A4O43246 635 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 DAPK3O43293 454 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 LAMTOR5O43504 91 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PLRG1O43660 514 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 AP1G1O43747 822 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 KIF5CO60282 957 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CEP104O60308 925 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SOCS5O75159 536 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GCATO75600 419 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TJP3O95049 919 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PGLSO95336 258 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MT-CYBP00156 380 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 JCHAINP01591 159 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 FGGP02679 453 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ITGAVP06756 1048 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ETS1P14921 441 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TCP1P17987 556 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 C5AR1P21730 350 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PSMA3P25788 255 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC8A1P32418 973 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HSPA9P38646 679 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MMP12P39900 470 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MAGEA6P43360 314 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MMP13P45452 471 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PSMD8P48556 350 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 AFF3P51826 1226 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ADPRHP54922 357 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 NAP1L1P55209 391 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GEMIN4P57678 1058 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 EIF3EP60228 445 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 RHOAP61586 193 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ST8SIA6P61647 398 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GNG11P61952 73 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 AP1S1P61966 158 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SNRPD1P62314 119 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PPP2CBP62714 309 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PPP2CAP67775 309 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 BNC1Q01954 994 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CREB5Q02930 508 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CSTF1Q05048 431 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 OLIG2Q13516 323 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SSPNQ14714 243 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CCNG2Q16589 344 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PLK5Q496M5 336 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TEX44Q53QW1 395 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 RALGPS1Q5JS13 557 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MARC1Q5VT66 337 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PMS2CLQ68D20 193 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF776Q68DI1 518 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TIGD7Q6NT04 549 aaPredicted RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SYT10Q6XYQ8 523 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 KDM7AQ6ZMT4 941 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MICALCLQ6ZW33 695 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 USP30Q70CQ3 517 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF605Q86T29 641 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ZC3H18Q86VM9 953 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CACUL1Q86Y37 369 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CAMK1DQ8IU85 385 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 MMAAQ8IVH4 418 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC50Q8IVM0 306 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PELI3Q8N2H9 469 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TSTD1Q8NFU3 115 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 SPATA22Q8NHS9 363 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 CCDC26Q8TAB7 109 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GRIN3AQ8TCU5 1115 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 TFB1MQ8WVM0 346 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HMGB4Q8WW32 186 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 C1orf54Q8WWF1 131 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GAB3Q8WWW8 586 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HTR3CQ8WXA8 447 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 RLN3Q8WXF3 142 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 DNASE2BQ8WZ79 361 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 OR8D1Q8WZ84 308 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 ANP32BQ92688 251 aaKnown RBP3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 P3H4Q92791 437 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 LRIG1Q96JA1 1093 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 PBKQ96KB5 322 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 HSPA12BQ96MM6 686 aa3.81□□□□□ -1.8
SMARCE1-215ENST00000578995 GDAP1L1Q96MZ0 367 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms