RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PPARGP37231 505 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 SPAM1P38567 509 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 POLD2P49005 469 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 SPINT3P49223 89 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 DGKEP52429 567 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CNTN1Q12860 1018 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 RALGDSQ12967 914 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 PTPRRQ15256 657 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TTC31Q49AM3 519 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 GPR33Q49SQ1 333 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 RNF187Q5TA31 235 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 LYPLAL1Q5VWZ2 237 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 ZNF470Q6ECI4 717 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CERS6Q6ZMG9 384 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 USP30Q70CQ3 517 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 STRA8Q7Z7C7 330 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 KBTBD6Q86V97 674 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TMPRSS6Q8IU80 811 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CILP2Q8IUL8 1156 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 TTC1Q99614 292 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CENPHQ9H3R5 247 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 POLMQ9NP87 494 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 INTS10Q9NVR2 710 aaKnown RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 BCCIPQ9P287 314 aaKnown RBP eCLIP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 FKBPLQ9UIM3 349 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 CORO1CQ9ULV4 474 aaPredicted RBP13.39□□□□□ -0.27
SRSF1-202ENST00000578430 ACTL7BQ9Y614 415 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 WDFY4Q6ZS81 3184 aa13.39□□□□□ -0.27
SRSF1-202ENST00000578430 GLYATL1P3A0A0U1RQE8 302 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 FAM155BO75949 473 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 C1SP09871 688 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 ELFN1P0C7U0 828 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 BPIP17213 487 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 ITGALP20701 1170 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 MC4RP32245 332 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 FOXN2P32314 431 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 SLC1A2P43004 574 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 LEPRP48357 1165 aaKnown RBP13.38□□□□□ -0.27
SRSF1-202ENST00000578430 CD151P48509 253 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 TTPAP49638 278 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 METAP1P53582 386 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 LIMK2P53671 638 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 XIAPP98170 497 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 CREB5Q02930 508 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 CACNG1Q06432 222 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 PTPRCAPQ14761 206 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 TMED2Q15363 201 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 CRY1Q16526 586 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 TYSND1Q2T9J0 566 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 POM121L1PQ3SYA9 428 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 PIP5KL1Q5T9C9 394 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 TIFABQ6ZNK6 161 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 ZNF765Q7L2R6 523 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 SYT13Q7L8C5 426 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 CYP2U1Q7Z449 544 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 SNX20Q7Z614 316 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 PTAR1Q7Z6K3 402 aaPredicted RBP13.38□□□□□ -0.27
SRSF1-202ENST00000578430 SIX5Q8N196 739 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 HDDC3Q8N4P3 179 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 AADATQ8N5Z0 425 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 OTUD6BQ8N6M0 293 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 ARL8AQ96BM9 186 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 TLCD1Q96CP7 247 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 MRRFQ96E11 262 aaKnown RBP13.38□□□□□ -0.27
SRSF1-202ENST00000578430 SIPA1Q96FS4 1042 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 AGAP2Q99490 1192 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 RBBP8Q99708 897 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 OMDQ99983 421 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 MKRN2Q9H000 416 aaKnown RBP13.38□□□□□ -0.27
SRSF1-202ENST00000578430 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 BPIFA1Q9NP55 256 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 IL1RAPL1Q9NZN1 696 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
SRSF1-202ENST00000578430 A8MX80 341 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 PRR33A8MZF0 331 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 GOLGA8TH3BQL2 631 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 NEMP1O14524 444 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 WNT9AO14904 365 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 SPINT1O43278 529 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 PIAS1O75925 651 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 SRP72O76094 671 aaKnown RBP13.37□□□□□ -0.27
SRSF1-202ENST00000578430 ACADMP11310 421 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 KRT15P19012 456 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 PMLP29590 882 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 LIG3P49916 1009 aa13.37□□□□□ -0.27
SRSF1-202ENST00000578430 CLCN5P51795 746 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms