RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 NLGN3Q9NZ94 848 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 PKD2L2Q9NZM6 624 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 KLQ9UEF7 1012 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 SHOC2Q9UQ13 582 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 AAR2Q9Y312 384 aaKnown RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 ZNF711Q9Y462 761 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 SPO11Q9Y5K1 396 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 SCN8AQ9UQD0 1980 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 ENC1O14682 589 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 TPP1O14773 563 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 SIGLEC6O43699 453 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 RASGRP1O95267 797 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 STIP1P31948 543 aaKnown RBP19.25■□□□□ 0.67
SS18-208ENST00000577751 ADRA1AP35348 466 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 GPR1P46091 355 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 GDF10P55107 478 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 PRPSAP1Q14558 356 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 PRRT3Q5FWE3 981 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 HENMT1Q5T8I9 393 aaKnown RBP19.25■□□□□ 0.67
SS18-208ENST00000577751 RANBP10Q6VN20 620 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 HID1Q8IV36 788 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 FAM181AQ8N9Y4 354 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 LMX1AQ8TE12 382 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 OR1E3Q8WZA6 343 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 PDXPQ96GD0 296 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 PPP1R2P1Q96PQ5 205 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 DUSP23Q9BVJ7 150 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 FRMD8Q9BZ67 464 aaPredicted RBP19.25■□□□□ 0.67
SS18-208ENST00000577751 CLPBQ9H078 707 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 FAM83DQ9H4H8 585 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 TRABDQ9H4I3 376 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 NFKBIL1Q9UBC1 381 aaPredicted RBP19.25■□□□□ 0.67
SS18-208ENST00000577751 APOBEC2Q9Y235 224 aaKnown RBP19.25■□□□□ 0.67
SS18-208ENST00000577751 JRKLQ9Y4A0 524 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 SPEGQ15772 3267 aa19.25■□□□□ 0.67
SS18-208ENST00000577751 LMO7DNF2Z398 122 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 AURKAO14965 403 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 FFAR2O15552 330 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 TRIM16O95361 564 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 AGTP01019 485 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 FGF1P05230 155 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 ALPPL2P10696 532 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 DCDC1P59894 354 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 C1orf61Q13536 156 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 PARP6Q2NL67 630 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 SLC25A41Q8N5S1 370 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 PNPLA1Q8N8W4 532 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 ADAMTS14Q8WXS8 1223 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 FSD1LQ9BXM9 530 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 GPR63Q9BZJ6 419 aa19.24■□□□□ 0.67
SS18-208ENST00000577751 MRPL40Q9NQ50 206 aaKnown RBP19.24■□□□□ 0.67
SS18-208ENST00000577751 GOLGA6CA6NDK9 693 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 GOLGA6BA6NDN3 693 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 METTL18O95568 372 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 TNFP01375 233 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 FUCA1P04066 466 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 CEACAM5P06731 702 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 GOLGA6DP0CG33 693 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 CKMT2P17540 419 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 HMGCLP35914 325 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 TNNT3P45378 269 aaPredicted RBP19.23■□□□□ 0.67
SS18-208ENST00000577751 SHC2P98077 582 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 P3H1Q32P28 736 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 KCTD11Q693B1 232 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 DRICH1Q6PGQ1 229 aaPredicted RBP19.23■□□□□ 0.67
SS18-208ENST00000577751 RD3Q7Z3Z2 195 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 RAB44Q7Z6P3 723 aaPredicted RBP19.23■□□□□ 0.67
SS18-208ENST00000577751 SDR16C5Q8N3Y7 309 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 FSTL5Q8N475 847 aaPredicted RBP19.23■□□□□ 0.67
SS18-208ENST00000577751 TTC30BQ8N4P2 665 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 GPR26Q8NDV2 337 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 C1orf54Q8WWF1 131 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 COX14Q96I36 57 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 HIC2Q96JB3 615 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 CDH19Q9H159 772 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 GOLGA6AQ9NYA3 693 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 HACD3Q9P035 362 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 CNOT6Q9ULM6 557 aaKnown RBP19.23■□□□□ 0.67
SS18-208ENST00000577751 SLC17A4Q9Y2C5 497 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 ZKSCAN5Q9Y2L8 839 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 PCDHGA1Q9Y5H4 931 aa19.23■□□□□ 0.67
SS18-208ENST00000577751 PRSS38A1L453 326 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 FADS2P1A8MWK0 482 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 YY2O15391 372 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 FGGP02679 453 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 CTSEP14091 401 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 ACP1P24666 158 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 CXCR5P32302 372 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 ACADVLP49748 655 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 FOXC1Q12948 553 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 DNAJC3Q13217 504 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 MSLNQ13421 630 aaPredicted RBP19.22■□□□□ 0.67
SS18-208ENST00000577751 ELOCQ15369 112 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 CCNG2Q16589 344 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 DEFB133Q30KQ1 61 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 HS1BP3Q53T59 392 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 ZNF569Q5MCW4 686 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 ZCCHC8Q6NZY4 707 aaKnown RBP19.22■□□□□ 0.67
SS18-208ENST00000577751 ARHGEF18Q6ZSZ5 1173 aa19.22■□□□□ 0.67
SS18-208ENST00000577751 MAIP1Q8WWC4 291 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms