RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SERINC3Q13530 473 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 C1orf61Q13536 156 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 PDE1CQ14123 709 aaPredicted RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 SYCP1Q15431 976 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 TCEA2Q15560 299 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 CDKN3Q16667 212 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 MYLK3Q32MK0 819 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 RALGPS1Q5JS13 557 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 WDR59Q6PJI9 974 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 CRTC1Q6UUV9 634 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 ZNF783Q6ZMS7 281 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 DNAAF5Q86Y56 855 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 RBFAQ8N0V3 343 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 DCBLD1Q8N8Z6 715 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 MSANTD4Q8NCY6 345 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 FAM172AQ8WUF8 416 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 RFFLQ8WZ73 363 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 NAF1Q96HR8 494 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 PPP1R16AQ96I34 528 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 FEM1CQ96JP0 617 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 KLHL32Q96NJ5 620 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 MBNL1Q9NR56 388 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 LMBRD1Q9NUN5 540 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 PRR13Q9NZ81 148 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 ADAM22Q9P0K1 906 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 SIRPGQ9P1W8 387 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 CGGBP1Q9UFW8 167 aaPredicted RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 IPO11Q9UI26 975 aaKnown RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 PNMA8BQ9ULN7 279 aaPredicted RBP6.3□□□□□ -1.4
NUP88-212ENST00000576708 SIK3Q9Y2K2 1263 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 HS3ST3A1Q9Y663 406 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 MYLKQ15746 1914 aa6.3□□□□□ -1.4
NUP88-212ENST00000576708 GOLGA4Q13439 2230 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 ANKRD11Q6UB99 2663 aaPredicted RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 SPTY2D1-AS1A0A0U1RR47 76 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 A0A1W2PNU3 283 aaPredicted RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 CPED1A4D0V7 1026 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 NEMP1O14524 444 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 FPGTO14772 594 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 SCAMP1O15126 338 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CCP110O43303 1012 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 TBX1O43435 398 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 BUB1O43683 1085 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 KDELR3O43731 214 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 AP1G1O43747 822 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 RAMP2O60895 175 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CSO75390 466 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 GCATO75600 419 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 TMCC1O94876 653 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 APC2O95996 2303 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CSF2P04141 144 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 PRKCGP05129 697 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GSNP06396 782 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 CDK4P11802 303 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 KRT3P12035 628 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CKMT1AP12532 417 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GPD1P21695 349 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 TGM2P21980 687 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 IGFALSP35858 605 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 STAT1P42224 750 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 PTPN9P43378 593 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 MAPKAPK2P49137 400 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 COPB1P53618 953 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 E2F1Q01094 437 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 TEKQ02763 1124 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 SLC20A2Q08357 652 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CCDC15Q0P6D6 951 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 EIF2B5Q13144 721 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 SGCGQ13326 291 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 POLD3Q15054 466 aaPredicted RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 DEFB133Q30KQ1 61 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ARL13BQ3SXY8 428 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ZNF805Q5CZA5 627 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 KIAA1161Q6NSJ0 714 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 SCYL2Q6P3W7 929 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GUSBP11Q6P575 273 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 GDPD4Q6W3E5 623 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 KYAT3Q6YP21 454 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 ARCQ7LC44 396 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 STRADAQ7RTN6 431 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 TTC7BQ86TV6 843 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 VPS36Q86VN1 386 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ZNF677Q86XU0 584 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ZNF354CQ86Y25 554 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ZNF548Q8NEK5 533 aaPredicted RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 OR2AP1Q8NGE2 309 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 IFI44Q8TCB0 444 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 LMX1AQ8TE12 382 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 CENPIQ92674 756 aaPredicted RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 FGF11Q92914 225 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 ISG20Q96AZ6 181 aaKnown RBP6.29□□□□□ -1.4
NUP88-212ENST00000576708 TBC1D31Q96DN5 1066 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 HMCESQ96FZ2 354 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 EXOC2Q96KP1 924 aa6.29□□□□□ -1.4
NUP88-212ENST00000576708 WRAP53Q9BUR4 548 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms