RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 OSBPL9Q96SU4 736 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 LRRC61Q9BV99 259 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 KCTD5Q9NXV2 234 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 NLGN3Q9NZ94 848 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 MOSPD1Q9UJG1 213 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 LRP4O75096 1905 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 TMEM202A6NGA9 273 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 CEP104O60308 925 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 RASGRP1O95267 797 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 CTSEP14091 401 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 KELP23276 732 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 CXCR5P32302 372 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 GPR1P46091 355 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 BLKP51451 505 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 HK3P52790 923 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 DAB2P98082 770 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SLC14A2Q15849 920 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 DEFB133Q30KQ1 61 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 CCDC70Q6NSX1 233 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 LYSMD3Q7Z3D4 306 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 OR56A4Q8NGH8 313 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 CCHCR1Q8TD31 782 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 ADAMTS14Q8WXS8 1223 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SCAMP4Q969E2 229 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 OXNAD1Q96HP4 312 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 FCRL5Q96RD9 977 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 LYSMD1Q96S90 227 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SCNM1Q9BWG6 230 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 ABCG8Q9H221 673 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 GBA3Q9H227 469 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SUDS3Q9H7L9 328 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 FGF22Q9HCT0 170 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 RRAGDQ9NQL2 400 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 PHPT1Q9NRX4 125 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-216ENST00000575599 FAM153AQ9UHL3 310 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 TRHDEQ9UKU6 1024 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 SHOC2Q9UQ13 582 aa13.22□□□□□ -0.29
RPAIN-216ENST00000575599 TCRBV7S2A1N4TA0A589 114 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 GCATO75600 419 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 STK10O94804 968 aaKnown RBP13.21□□□□□ -0.29
RPAIN-216ENST00000575599 NDST3O95803 873 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CELA2BP08218 269 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-216ENST00000575599 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 MYF5P13349 255 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 TRIM23P36406 574 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 ACADVLP49748 655 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 WNT3AP56704 352 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 SHC2P98077 582 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CDK3Q00526 305 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CDKN3Q16667 212 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 PROX2Q3B8N5 592 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-216ENST00000575599 SLC25A41Q8N5S1 370 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 OR1E3Q8WZA6 343 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 APOLD1Q96LR9 279 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 RIOK2Q9BVS4 552 aaKnown RBP13.21□□□□□ -0.29
RPAIN-216ENST00000575599 FSD1LQ9BXM9 530 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CARD9Q9H257 536 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 ZFYVE1Q9HBF4 777 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 PKD2L2Q9NZM6 624 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 WASF3Q9UPY6 502 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 ZNF711Q9Y462 761 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.29
RPAIN-216ENST00000575599 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CES2O00748 559 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 RFPL3O75679 317 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 TNFP01375 233 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ANXA6P08133 673 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CKMT2P17540 419 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CHRNA4P43681 627 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 SPINT3P49223 89 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 DPTQ07507 201 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 KLF1Q13351 362 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-216ENST00000575599 MPP3Q13368 585 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 ANKRD20A3Q5VUR7 823 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 DOK6Q6PKX4 331 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 DHRS13Q6UX07 377 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 TRIM74Q86UV6 250 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 NRSN1Q8IZ57 195 aa13.2□□□□□ -0.3
RPAIN-216ENST00000575599 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms