RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 CD9P21926 228 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FCARP24071 287 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ATP5F1P24539 256 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 HNF1BP35680 557 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 NNMTP40261 264 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PTGER3P43115 390 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 RECQLP46063 649 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GLRBP48167 497 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TTPAP49638 278 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CDKN1CP49918 316 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 DNAJB13P59910 316 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ABCE1P61221 599 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TIAL1Q01085 375 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PFKPQ01813 784 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CACNG1Q06432 222 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 HYAL1Q12794 435 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ASPHQ12797 758 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CSHL1Q14406 222 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ACAP2Q15057 778 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PDGFRLQ15198 375 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FAM83EQ2M2I3 478 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GAB4Q2WGN9 574 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GALNTL6Q49A17 601 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ZRANB3Q5FWF4 1079 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TCEAL5Q5H9L2 206 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 AARS2Q5JTZ9 985 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SPDYAQ5MJ70 313 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 IER5LQ5T953 404 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 AGAP9Q5VTM2 703 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 LIPMQ5VYY2 423 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TRIM68Q6AZZ1 485 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GRAMD4Q6IC98 578 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PSAPL1Q6NUJ1 521 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 KLC3Q6P597 504 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SYCE2Q6PIF2 218 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TMEM207Q6UWW9 146 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GDPD4Q6W3E5 623 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CERS6Q6ZMG9 384 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 DPY19L3Q6ZPD9 716 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TPRG1Q6ZUI0 275 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GET4Q7L5D6 327 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ZSWIM9Q86XI8 627 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ETFBKMTQ8IXQ9 262 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TNS4Q8IZW8 715 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 STK40Q8N2I9 435 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FITM2Q8N6M3 262 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PAF1Q8N7H5 531 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GBP7Q8N8V2 638 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CHST14Q8NCH0 376 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 PPP4R1Q8TF05 950 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FRS2Q8WU20 508 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 HEXDCQ8WVB3 486 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 EID2BQ96D98 161 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SCRN2Q96FV2 425 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 MCCC1Q96RQ3 725 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SORT1Q99523 831 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FAM83CQ9BQN1 747 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 HEPHQ9BQS7 1158 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SIKE1Q9BRV8 207 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GATA5Q9BWX5 397 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TMEM120AQ9BXJ8 343 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 C20orf27Q9GZN8 174 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CCDC68Q9H2F9 335 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 MRPL46Q9H2W6 279 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 FAM96AQ9H5X1 160 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 NSUN3Q9H649 340 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 IGFLR1Q9H665 355 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 ZDHHC6Q9H6R6 413 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 KCNK13Q9HB14 408 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SYTL2Q9HCH5 934 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 GPAMQ9HCL2 828 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 BPIFA1Q9NP55 256 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 BRWD1Q9NSI6 2320 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 KCNK4Q9NYG8 393 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 CPSF2Q9P2I0 782 aaKnown RBP6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 XPR1Q9UBH6 696 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 METRNQ9UJH8 293 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 DCTN4Q9UJW0 460 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 APPL1Q9UKG1 709 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SLC8A2Q9UPR5 921 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 COMMD10Q9Y6G5 202 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 SLC30A1Q9Y6M5 507 aa6.12□□□□□ -1.43
TRAPPC1-204ENST00000571947 TRBV5-4A0A0C4DH59 114 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 A0A0G2JND7 137 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 A0A0U1RQS6 177 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 C1orf232A0A0U1RR37 186 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 TSPAN11A1L157 253 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 NPIPB15A6NHN6 443 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 TTC34A8MYJ7 566 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 ANKRD65E5RJM6 399 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 F8W8V4 182 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 GAPDHSO14556 408 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 LINC01565O15544 149 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 BNIP3LO60238 219 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 DLX3O60479 287 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 NPHS1O60500 1241 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 DNAJC6O75061 913 aa6.11□□□□□ -1.43
TRAPPC1-204ENST00000571947 TULP3O75386 442 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms