RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FGD3Q5JSP0 725 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 LCN8Q6JVE9 175 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 XKR5Q6UX68 686 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 CROCCP3Q8IVE0 287 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 FEM1CQ96JP0 617 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 PTBP2Q9UKA9 531 aaKnown RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 TRIM64CA6NLI5 447 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 H3BMQ9 156 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 BAIAP3O94812 1187 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 GFAPP14136 432 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 CD1DP15813 335 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 CRYBB1P53674 252 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 ACBD5Q5T8D3 534 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 MANEALQ5VSG8 457 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 IQSEC1Q6DN90 963 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 PHYKPLQ8IUZ5 450 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 TRPV3Q8NET8 790 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 GIPC3Q8TF64 312 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 SEPT8Q92599 483 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 COG8Q96MW5 612 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 SEPHS2Q99611 448 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 RPF2Q9H7B2 306 aaKnown RBP17.43■□□□□ 0.38
SCARF1-205ENST00000571272 USP22Q9UPT9 525 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 TIMM22Q9Y584 194 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 HS3ST4Q9Y661 456 aa17.43■□□□□ 0.38
SCARF1-205ENST00000571272 SUPT3HO75486 399 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 GJB3O75712 270 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 FAM163BP0C2L3 166 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 CD247P20963 164 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 BRCC3P46736 316 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 BNIP2Q12982 314 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ARTNQ5T4W7 220 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 IRAK1BP1Q5VVH5 260 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 PRMT9Q6P2P2 845 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF549Q6P9A3 640 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 GPR142Q7Z601 462 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 PATL1Q86TB9 770 aaKnown RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 LRRTM3Q86VH5 581 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SMYD1Q8NB12 490 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 TEX37Q96LM6 180 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 TMEM74Q96NL1 305 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 NOL6Q9H6R4 1146 aaKnown RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ARNT2Q9HBZ2 717 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 GID8Q9NWU2 228 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 POLG2Q9UHN1 485 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 MIA3Q5JRA6 1907 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 PDHXO00330 501 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 RASAL1O95294 804 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 WISP3O95389 354 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SNAP29O95721 258 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 LBPP18428 481 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 GSK3BP49841 420 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ADAM17P78536 824 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 CACNB2Q08289 660 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 NFYCQ13952 458 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 DHRSXQ8N5I4 330 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 NPLOC4Q8TAT6 608 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ADAMTS16Q8TE57 1224 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 IMP4Q96G21 291 aaKnown RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SEMA4BQ9NPR2 832 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SLC38A7Q9NVC3 462 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SLAMF8Q9P0V8 285 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SLC7A4O43246 635 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 HAPLN1P10915 354 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 IMPDH2P12268 514 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 HOXC13P31276 330 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 NAA20P61599 178 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 BEX3Q00994 111 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 AARS2Q5JTZ9 985 aaKnown RBP17.42■□□□□ 0.38
SCARF1-205ENST00000571272 SCIMPQ6UWF3 145 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ABRAXAS1Q6UWZ7 409 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 KCTD8Q6ZWB6 473 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 PPP1R2P1Q96PQ5 205 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 ALG2Q9H553 416 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 FAIMQ9NVQ4 179 aa17.42■□□□□ 0.38
SCARF1-205ENST00000571272 BOLA2-SMG1P6H3BVE0 249 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PEX11BO96011 259 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PIRTP0C851 137 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 MTHFD2P13995 350 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 TNK2Q07912 1038 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 SIRPB2Q5JXA9 342 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 BRMS1LQ5PSV4 323 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 TMTC4Q5T4D3 741 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 Q6ZNX1 250 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 RAB44Q7Z6P3 723 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 HMCESQ96FZ2 354 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 VPS50Q96JG6 964 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 MFSD1Q9H3U5 465 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 SDR39U1Q9NRG7 319 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 UXTQ9UBK9 157 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PCDHA9Q9Y5H5 950 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 PLXNB2O15031 1838 aa17.41■□□□□ 0.38
SCARF1-205ENST00000571272 B4GAT1O43505 415 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms