RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ATG4DQ86TL0 474 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 RPAINQ86UA6 219 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 P3H2Q8IVL5 708 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 GPR135Q8IZ08 494 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 TXNDC5Q8NBS9 432 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 C11orf65Q8NCR3 313 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 BEND2Q8NDZ0 799 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 CADM4Q8NFZ8 388 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 KCNJ9Q92806 393 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 ATP6V0A1Q93050 837 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 FAM136AQ96C01 138 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 MBD6Q96DN6 1003 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 SAT2Q96F10 170 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 SIPA1Q96FS4 1042 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC43Q96MW1 224 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 INPP4AQ96PE3 977 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 RAB3IPQ96QF0 476 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 FIZ1Q96SL8 496 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 PRRX2Q99811 253 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 PI4K2AQ9BTU6 479 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 TUBB6Q9BUF5 446 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 THUMPD3Q9BV44 507 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 IFIH1Q9BYX4 1025 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 KRT23Q9C075 422 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 AMBRA1Q9C0C7 1298 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 DNAI2Q9GZS0 605 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 C12orf65Q9H3J6 166 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 COPS7BQ9H9Q2 264 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 POLR1BQ9H9Y6 1135 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 VAT1LQ9HCJ6 419 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 FBRSL1Q9HCM7 1045 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 IL1RAPL1Q9NZN1 696 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 NTMQ9P121 344 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 EPS15L1Q9UBC2 864 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 PEMTQ9UBM1 199 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 HSPB7Q9UBY9 170 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 MAD2L2Q9UI95 211 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 INTS6Q9UL03 887 aaKnown RBP3.3□□□□□ -1.88
CNOT1-221ENST00000569924 MTMR6Q9Y217 621 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 PCDHB2Q9Y5E7 798 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 CAPN7Q9Y6W3 813 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 TTC3P53804 2025 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 ATG2AQ2TAZ0 1938 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF462Q96JM2 2506 aa3.3□□□□□ -1.88
CNOT1-221ENST00000569924 KAT6AQ92794 2004 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ADGRA3Q8IWK6 1321 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 A0A1W2PQF6 199 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MBLAC1A4D2B0 266 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC151A5D8V7 595 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 EIF3CLB5ME19 914 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 KCNJ18B7U540 433 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 INO80B-WBP1J3KQ70 363 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PSMD9O00233 223 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SCAMP1O15126 338 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 TRIM24O15164 1050 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MBTPS2O43462 519 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 LIASO43766 372 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ERN1O75460 977 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 RECQL4O94761 1208 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 IPO13O94829 963 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 VNN1O95497 513 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 GPANK1O95872 356 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CHRNA1P02708 482 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MMP1P03956 469 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ALDOAP04075 364 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 INHBBP09529 407 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CYP4B1P13584 511 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF37AP17032 561 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 IGFBP2P18065 325 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 GABRB1P18505 474 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 FGFR4P22455 802 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PRPH2P23942 346 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 HOXA13P31271 388 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SSTR4P31391 388 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CTNNB1P35222 781 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 LIG4P49917 911 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 RAC3P60763 192 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 INSM1Q01101 510 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 MGAT3Q09327 533 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 AP1B1Q10567 949 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 HYAL1Q12794 435 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CSTF3Q12996 717 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 COASYQ13057 564 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SLMAPQ14BN4 828 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SLC18A3Q16572 532 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 IMMTQ16891 758 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CD300EQ496F6 205 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 KRTCAP3Q53RY4 240 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF805Q5CZA5 627 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 DCAF17Q5H9S7 520 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF667Q5HYK9 610 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 ALKBH5Q6P6C2 394 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 TMEM88Q6PEY1 159 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SHQ1Q6PI26 577 aaKnown RBP3.29□□□□□ -1.88
CNOT1-221ENST00000569924 CNSTQ6PJW8 725 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 SLC30A9Q6PML9 568 aa3.29□□□□□ -1.88
CNOT1-221ENST00000569924 PET117Q6UWS5 81 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms