RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 KCNE2Q9Y6J6 123 aa4.85□□□□□ -1.63
CHD9-220ENST00000569794 KCNJ18B7U540 433 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 PLOD2O00469 737 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 NDC80O14777 642 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 SEPT4O43236 478 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 DIAPH2O60879 1101 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 FTCDO95954 541 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 F7P08709 466 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 MYBL1P10243 752 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 MAPK3P27361 379 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 PTP4A2Q12974 167 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TRAF3Q13114 568 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TNFAIP1Q13829 316 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 HNF4GQ14541 408 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 CRYMQ14894 314 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TAF7Q15545 349 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 HLFQ16534 295 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 PRICKLE4Q2TBC4 344 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 C2orf76Q3KRA6 126 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 ADALQ6DHV7 355 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 DGAT2L7PQ6IED9 249 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 CAVIN1Q6NZI2 390 aaKnown RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 FJX1Q86VR8 437 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 FSIP1Q8NA03 581 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 POGLUT1Q8NBL1 392 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 OR14A16Q8NHC5 309 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 ZCCHC10Q8TBK6 192 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 BICD2Q8TD16 824 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 ATP6V0A1Q93050 837 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 IGSF21Q96ID5 467 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 C16orf45Q96MC5 204 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 RAB3IPQ96QF0 476 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 FIZ1Q96SL8 496 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TNMDQ9H2S6 317 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TTYH1Q9H313 450 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 THAP9Q9H5L6 903 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 STN1Q9H668 368 aaKnown RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 ZDHHC7Q9NXF8 308 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 RABL2AQ9UBK7 228 aaPredicted RBP4.84□□□□□ -1.63
CHD9-220ENST00000569794 FBXO4Q9UKT5 387 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 SARDHQ9UL12 918 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 KLHL20Q9Y2M5 609 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 CCL27Q9Y4X3 112 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 POMT1Q9Y6A1 747 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 SLC4A4Q9Y6R1 1079 aa4.84□□□□□ -1.63
CHD9-220ENST00000569794 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 LIPT2A6NK58 231 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 BMPR1BO00238 502 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 ZBTB14O43829 449 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 SLC22A3O75751 556 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 RPP40O75818 363 aaKnown RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 CXCR3P49682 368 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CDH15P55291 814 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 AKAP17AQ02040 695 aaKnown RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 YWHAHQ04917 246 aaPredicted RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 ACTN3Q08043 901 aaPredicted RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 C17orf67Q0P5P2 114 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 GRSF1Q12849 480 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-220ENST00000569794 SF3A3Q12874 501 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-220ENST00000569794 RBM39Q14498 530 aaKnown RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 SLC39A14Q15043 492 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 SF3B4Q15427 424 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHD9-220ENST00000569794 NTRK2Q16620 822 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 SMU1Q2TAY7 513 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 TRIM60Q495X7 471 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 LRRC24Q50LG9 513 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 KRBOX4Q5JUW0 171 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CEP85LQ5SZL2 805 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 TMEM154Q6P9G4 183 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 KLHL35Q6PF15 583 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CCDC73Q6ZRK6 1079 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CCDC186Q7Z3E2 898 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 DNAAF5Q86Y56 855 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 LINC00346Q8IVM7 164 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CCDC105Q8IYK2 499 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 ADGRF2Q8IZF7 708 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 TDRD5Q8NAT2 981 aaKnown RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 ANKRD20A12PQ8NF67 263 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 PTP4A1Q93096 173 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 SAAL1Q96ER3 474 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CFAP53Q96M91 514 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 CMTM3Q96MX0 182 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 GCNAQ96QF7 691 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 PIP5K1AQ99755 562 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 PHF7Q9BWX1 381 aaPredicted RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 TEX12Q9BXU0 123 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 IL25Q9H293 177 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 MROH8Q9H579 483 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 SH2D4AQ9H788 454 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 PLEKHA2Q9HB19 425 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 FSCN3Q9NQT6 498 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 INTS10Q9NVR2 710 aaKnown RBP4.83□□□□□ -1.64
CHD9-220ENST00000569794 PPP1R14DQ9NXH3 145 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 EHD2Q9NZN4 543 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 GDAQ9Y2T3 454 aa4.83□□□□□ -1.64
CHD9-220ENST00000569794 RUSC2Q8N2Y8 1516 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms