RNA–Protein interactions for RNA: ENST00000568806.1

TNRC6A-214, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 298 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-214ENST00000568806 ZNF34Q8IZ26 560 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 SRBD1Q8N5C6 995 aaKnown RBP4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 WDTC1Q8N5D0 677 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 NEK9Q8TD19 979 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 USP6NLQ92738 828 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 C1orf74Q96LT6 269 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 SPRY4Q9C004 299 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 MAF1Q9H063 256 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 LRRC4Q9HBW1 653 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 EIF2B3Q9NR50 452 aaKnown RBP4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 C1RLQ9NZP8 487 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 SELENONQ9NZV5 590 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 SIX4Q9UIU6 781 aa4.62□□□□□ -1.67
TNRC6A-214ENST00000568806 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 AP3D1O14617 1153 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 IKBKBO14920 756 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CLGNO14967 610 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 MID1O15344 667 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE7O76087 117 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 LINC00271P0C7V0 271 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE12FP0CL80 117 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE12GP0CL81 117 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE12IP0CL82 117 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ACADMP11310 421 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 FGF3P11487 239 aaPredicted RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 SRCP12931 536 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 LAMP2P13473 410 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 RXRGP48443 463 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 SEC61BP60468 96 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ARF3P61204 181 aaPredicted RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CSNK2A1P68400 391 aaPredicted RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ARF1P84077 181 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 EEF1A2Q05639 463 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 NIPAL4Q0D2K0 466 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 LMOD3Q0VAK6 560 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ZNF155Q12901 538 aaPredicted RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CDC16Q13042 620 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE1Q13065 139 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 GAGE4Q13068 117 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 EIF4A2Q14240 407 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 NAB2Q15742 525 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 KIF19Q2TAC6 998 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ZSCAN23Q3MJ62 389 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 KCNT1Q5JUK3 1230 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CAPRIN2Q6IMN6 1127 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 KLHL35Q6PF15 583 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 DLK2Q6UY11 383 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CCNI2Q6ZMN8 369 aaPredicted RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 KRBA2Q6ZNG9 492 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CLEC17AQ6ZS10 378 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CHERPQ8IWX8 916 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CSNK2A3Q8NEV1 391 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 APBB2Q92870 758 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 RHBDF1Q96CC6 855 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 TMEM19Q96HH6 336 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 NAF1Q96HR8 494 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 CMTM3Q96MX0 182 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 MTERF1Q99551 399 aaKnown RBP4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 SH3GL2Q99962 352 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 C1QTNF4Q9BXJ3 329 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 MUC13Q9H3R2 512 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 PIGMQ9H3S5 423 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 KAT14Q9H8E8 782 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 BLOC1S4Q9NUP1 217 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 ZNF224Q9NZL3 707 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 PROCRQ9UNN8 238 aa4.61□□□□□ -1.67
TNRC6A-214ENST00000568806 A0A0G2JPF8 293 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 HNRNPCL2B2RXH8 293 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 HNRNPCL3B7ZW38 293 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 TIPRLO75663 272 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 RFPL2O75678 378 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 HNRNPCL4P0DMR1 293 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 DDX5P17844 614 aaKnown RBP4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 HADHAP40939 763 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 CLCNKAP51800 687 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 NLRP5P59047 1200 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SLC20A2Q08357 652 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 COASYQ13057 564 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 TNFAIP1Q13829 316 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 CRELD2Q6UXH1 353 aaPredicted RBP4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 BEST3Q8N1M1 668 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 PCDH20Q8N6Y1 951 aaKnown RBP4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 ZNF441Q8N8Z8 693 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SPATA22Q8NHS9 363 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SPATA20Q8TB22 786 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 WFIKKN2Q8TEU8 576 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 ELMOD3Q96FG2 381 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 LMLNQ96KR4 655 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SMC6Q96SB8 1091 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 PDZD7Q9H5P4 517 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SH2D4AQ9H788 454 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 SMARCAL1Q9NZC9 954 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 COPG2Q9UBF2 871 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 LOXL2Q9Y4K0 774 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 CLIC4Q9Y696 253 aa4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 PDS5AQ29RF7 1337 aaKnown RBP4.6□□□□□ -1.67
TNRC6A-214ENST00000568806 MYO1GB0I1T2 1018 aa4.59□□□□□ -1.67
TNRC6A-214ENST00000568806 F5H0A9 414 aaPredicted RBP4.59□□□□□ -1.67
TNRC6A-214ENST00000568806 ACOT8O14734 319 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms