RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 COL27A1Q8IZC6 1860 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-211ENST00000568586 PJA2O43164 708 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 IVLP07476 585 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 PTPN3P26045 913 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 GPR1P46091 355 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 TAF8Q7Z7C8 310 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 DAAM2Q86T65 1068 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 TFB1MQ8WVM0 346 aaKnown RBP29.28■■■□□ 2.28
RAB40C-211ENST00000568586 GLOD4Q9HC38 313 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 GULP1Q9UBP9 304 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 CD84Q9UIB8 345 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 GPSM3Q9Y4H4 160 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 PCDHB1Q9Y5F3 818 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 DUSP10Q9Y6W6 482 aa29.28■■■□□ 2.28
RAB40C-211ENST00000568586 NBEAQ8NFP9 2946 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 IPO7O95373 1038 aaKnown RBP29.27■■■□□ 2.28
RAB40C-211ENST00000568586 CTNNA1P35221 906 aaKnown RBP29.27■■■□□ 2.28
RAB40C-211ENST00000568586 WASHC5Q12768 1159 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 ISXQ2M1V0 245 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 TMEM139Q8IV31 216 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 COX14Q96I36 57 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 WDR24Q96S15 920 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 CCDC3Q9BQI4 270 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 LACRTQ9GZZ8 138 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 CARS2Q9HA77 564 aaKnown RBP29.27■■■□□ 2.28
RAB40C-211ENST00000568586 PCDHA3Q9Y5H8 950 aa29.27■■■□□ 2.28
RAB40C-211ENST00000568586 NTN3O00634 580 aaPredicted RBP29.26■■■□□ 2.27
RAB40C-211ENST00000568586 MTSS1O43312 755 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 NOBOXO60393 691 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 CSO75390 466 aaKnown RBP29.26■■■□□ 2.27
RAB40C-211ENST00000568586 CDC25BP30305 580 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 SPINT3P49223 89 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 COPS2P61201 443 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 TCEA2Q15560 299 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 KAZNQ674X7 775 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 BBS12Q6ZW61 710 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 B4GALNT4Q76KP1 1039 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 NRROSQ86YC3 692 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 FAM46DQ8NEK8 389 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 CCL4L1Q8NHW4 92 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 P3H4Q92791 437 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 AGAP2Q99490 1192 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 RIOK2Q9BVS4 552 aaKnown RBP29.26■■■□□ 2.27
RAB40C-211ENST00000568586 SEPT10Q9P0V9 454 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 SIRPGQ9P1W8 387 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 SUFUQ9UMX1 484 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 EFR3BQ9Y2G0 817 aa29.26■■■□□ 2.27
RAB40C-211ENST00000568586 A0A087WV48 116 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 C1orf232A0A0U1RR37 186 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 CDK18Q07002 472 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 FAM182AQ5T1J6 154 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 HENMT1Q5T8I9 393 aaKnown RBP29.25■■■□□ 2.27
RAB40C-211ENST00000568586 C17orf82Q86X59 251 aaPredicted RBP29.25■■■□□ 2.27
RAB40C-211ENST00000568586 PTCD2Q8WV60 388 aaKnown RBP29.25■■■□□ 2.27
RAB40C-211ENST00000568586 BAG1Q99933 345 aaPredicted RBP29.25■■■□□ 2.27
RAB40C-211ENST00000568586 MAGEE1Q9HCI5 957 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 IMPACTQ9P2X3 320 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 APPL1Q9UKG1 709 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 AK5Q9Y6K8 562 aa29.25■■■□□ 2.27
RAB40C-211ENST00000568586 PNLIPP16233 465 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 CD68P34810 354 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-211ENST00000568586 POLD2P49005 469 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 VAV2P52735 878 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 LLGL1Q15334 1064 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 CERCAMQ5T4B2 595 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 RBM44Q6ZP01 1051 aaKnown RBP29.24■■■□□ 2.27
RAB40C-211ENST00000568586 LRRC57Q8N9N7 239 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 CCHCR1Q8TD31 782 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 EID2BQ96D98 161 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 HIC2Q96JB3 615 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 VAT1Q99536 393 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 RABGEF1Q9UJ41 708 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 MOSPD1Q9UJG1 213 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 CNOT6Q9ULM6 557 aaKnown RBP29.24■■■□□ 2.27
RAB40C-211ENST00000568586 ST14Q9Y5Y6 855 aa29.24■■■□□ 2.27
RAB40C-211ENST00000568586 GOLGA6CA6NDK9 693 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GOLGA6BA6NDN3 693 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 HACD1B0YJ81 288 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 DXOO77932 396 aaKnown RBP29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GOLGA6DP0CG33 693 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GLB1P16278 677 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 CTNNA2P26232 953 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 PTPN7P35236 360 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 LSSP48449 732 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 XRCC4Q13426 336 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GALNT3Q14435 633 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 HLTFQ14527 1009 aaKnown RBP eCLIP29.23■■■□□ 2.27
RAB40C-211ENST00000568586 SPATA22Q8NHS9 363 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 CCDC74AQ96AQ1 378 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 QKIQ96PU8 341 aaKnown RBP eCLIP29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GSDMCQ9BYG8 508 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 FAM83DQ9H4H8 585 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 GOLGA6AQ9NYA3 693 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 PKD2L2Q9NZM6 624 aa29.23■■■□□ 2.27
RAB40C-211ENST00000568586 NFKBIL1Q9UBC1 381 aaPredicted RBP29.23■■■□□ 2.27
RAB40C-211ENST00000568586 ARHGEF17Q96PE2 2063 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-211ENST00000568586 APOC4-APOC2K7ER74 178 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 BRINP1O60477 761 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 USP12O75317 370 aa29.22■■■□□ 2.27
RAB40C-211ENST00000568586 NDST3O95803 873 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms