RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PCDHB1Q9Y5F3 818 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 HEY1Q9Y5J3 304 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 ADGRG1Q9Y653 693 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 MGAQ8IWI9 3026 aa4.78□□□□□ -1.64
CLK3-219ENST00000567805 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 FAM208BQ5VWN6 2430 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 UNC13CQ8NB66 2214 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 APC2O95996 2303 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 A0A0A6YYK5 440 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 C1orf232A0A0U1RR37 186 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GOLGA6CA6NDK9 693 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GOLGA6BA6NDN3 693 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 B4DGG1 531 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ANKRD66B4E2M5 251 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 TMX2-CTNND1H3BSU7 103 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 KCNK1O00180 336 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 NTN3O00634 580 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 APOL1O14791 398 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PSTPIP1O43586 416 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 SPOPO43791 374 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 NUDT21O43809 227 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 LCA5LO95447 670 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 SOD1P00441 154 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PRLP01236 227 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 JCHAINP01591 159 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 KRT1P04264 644 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 MPOP05164 745 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CEACAM5P06731 702 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 IVLP07476 585 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 MMP2P08253 660 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GOLGA6DP0CG33 693 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GLB1P16278 677 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 COMTP21964 271 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CD86P42081 329 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 MAGEA1P43355 309 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ABCG1P45844 678 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GPR1P46091 355 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 NR2C2P49116 596 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 STC1P52823 247 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PDX1P52945 283 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PCBP4P57723 403 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 DSC2Q02487 901 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PTSQ03393 145 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 NIPAL4Q0D2K0 466 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 AP1B1Q10567 949 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ILF3Q12906 894 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK3-219ENST00000567805 TFDP2Q14188 446 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 HLTFQ14527 1009 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK3-219ENST00000567805 IHHQ14623 411 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PDK1Q15118 436 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PTPRRQ15256 657 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 C14orf28Q4W4Y0 310 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 C3orf38Q5JPI3 329 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CERCAMQ5T4B2 595 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 KCTD16Q68DU8 428 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 OGFOD3Q6PK18 319 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CRTC1Q6UUV9 634 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ADAMTSL4Q6UY14 1074 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 Q6ZVL8 140 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 BZW1Q7L1Q6 419 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 PDZD3Q86UT5 571 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 RFX6Q8HWS3 928 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CCNJLQ8IV13 435 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CCDC170Q8IYT3 715 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 NRSN1Q8IZ57 195 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 PELI3Q8N2H9 469 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK3-219ENST00000567805 TC2NQ8N9U0 490 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ZNF248Q8NDW4 579 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 WDR36Q8NI36 951 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 ARRDC2Q8TBH0 407 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GPBAR1Q8TDU6 330 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CCDC74AQ96AQ1 378 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 AP2M1Q96CW1 435 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 SCARF2Q96GP6 870 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 ATXN7L3BQ96GX2 97 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 LIN37Q96GY3 246 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 HIC2Q96JB3 615 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 OLFM3Q96PB7 478 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GFM1Q96RP9 751 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 LGMNQ99538 433 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 MLPHQ9BV36 600 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 ADGRE3Q9BY15 652 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GSDMCQ9BYG8 508 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 FRMD8Q9BZ67 464 aaPredicted RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 STRADBQ9C0K7 418 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 BRD8Q9H0E9 1235 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CDH19Q9H159 772 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ABCG8Q9H221 673 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 DPEP2Q9H4A9 486 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CARS2Q9HA77 564 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 LUC7LQ9NQ29 371 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 THSD1Q9NS62 852 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 GOLGA6AQ9NYA3 693 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 MOSPD1Q9UJG1 213 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 RALYQ9UKM9 306 aaKnown RBP4.77□□□□□ -1.65
CLK3-219ENST00000567805 SUFUQ9UMX1 484 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 SATB2Q9UPW6 733 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CHKBQ9Y259 395 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 SLC17A4Q9Y2C5 497 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms