RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ITPRIPL1Q6GPH6 555 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 LCN10Q6JVE6 187 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 CHST9Q7L1S5 443 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 SZRD1Q7Z422 152 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 RNF168Q8IYW5 571 aaPredicted RBP4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 ADGRF2Q8IZF7 708 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 SRBD1Q8N5C6 995 aaKnown RBP4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 TMED6Q8WW62 240 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 SGCDQ92629 289 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 ELMOD3Q96FG2 381 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 LYZL4Q96KX0 146 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 MARK4Q96L34 752 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 FIZ1Q96SL8 496 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 PCYT2Q99447 389 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 MMTAG2Q9BU76 263 aaKnown RBP4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 RRP7BPQ9NSQ0 103 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 OCIAD1Q9NX40 245 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 WNT16Q9UBV4 365 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 MAU2Q9Y6X3 613 aa4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 RSF1Q96T23 1441 aaPredicted RBP4.8□□□□□ -1.64
SHCBP1-206ENST00000567698 ANKRD18BA2A2Z9 1011 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 CDRT15L2A8MXV6 281 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 MYO1GB0I1T2 1018 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 PTGES3LE9PB15 166 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 ATP2A1O14983 1001 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 JRKO75564 520 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE7O76087 117 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 BDNFP23560 247 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 CDC25AP30304 524 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 HOXC9P31274 260 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 APOBEC1P41238 236 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 CDH8P55286 799 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 TAS2R40P59535 323 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE1Q13065 139 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 GAGE4Q13068 117 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 MYBPHQ13203 477 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 FHL1Q13642 323 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 ACVR2BQ13705 512 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 PCGF3Q3KNV8 242 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 XKR9Q5GH70 373 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 SPATA2LQ8IUW3 424 aaPredicted RBP4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 TRPC4APQ8TEL6 797 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 FAM120BQ96EK7 910 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 RSRC1Q96IZ7 334 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 PCGF1Q9BSM1 259 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 KAT14Q9H8E8 782 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 FBXL17Q9UF56 701 aa4.79□□□□□ -1.64
SHCBP1-206ENST00000567698 TAF1P21675 1872 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 AP3D1O14617 1153 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 MID1O15344 667 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 NDUFS3O75489 264 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 RFPL2O75678 378 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 PGM3O95394 542 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 CLDN14O95500 239 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 TUBBP07437 444 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 FCGR1AP12314 374 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SRCP12931 536 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 MCM3P25205 808 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 HOXA13P31271 388 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 DSCR9P59020 149 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 PRAMEP78395 509 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 ZNF155Q12901 538 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 DECR1Q16698 335 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 ATP13A5Q4VNC0 1218 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 FRG2Q64ET8 278 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 TMEM198Q66K66 360 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SIGIRRQ6IA17 410 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SLC36A4Q6YBV0 504 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 ZNF517Q6ZMY9 492 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 PCDH20Q8N6Y1 951 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 POMGNT1Q8WZA1 660 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 PGAM5Q96HS1 289 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SDF4Q9BRK5 362 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 TMEM204Q9BSN7 226 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 FTOQ9C0B1 505 aaKnown RBP eCLIP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 PIGMQ9H3S5 423 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 COPG2Q9UBF2 871 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 VPS28Q9UK41 221 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 TTC7AQ9ULT0 858 aaPredicted RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 MTMR6Q9Y217 621 aa4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 LAS1LQ9Y4W2 734 aaKnown RBP4.78□□□□□ -1.64
SHCBP1-206ENST00000567698 ATXN2Q99700 1313 aaKnown RBP4.77□□□□□ -1.65
SHCBP1-206ENST00000567698 AKR1B15C9JRZ8 316 aaPredicted RBP4.77□□□□□ -1.65
SHCBP1-206ENST00000567698 ZNF587BE7ETH6 402 aa4.77□□□□□ -1.65
SHCBP1-206ENST00000567698 AHCYL1O43865 530 aa4.77□□□□□ -1.65
SHCBP1-206ENST00000567698 SLC28A2O43868 658 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms