RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 BICC1Q9H694 974 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 EPHX3Q9H6B9 360 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 MAGEE1Q9HCI5 957 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 BEX4Q9NWD9 120 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 ADPRHL2Q9NX46 363 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 FBXO9Q9UK97 447 aaPredicted RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 MRPS28Q9Y2Q9 187 aaKnown RBP2.13□□□□□ -2.07
SMG1-212ENST00000566328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.13□□□□□ -2.07
SMG1-212ENST00000566328 GDAQ9Y2T3 454 aa2.13□□□□□ -2.07
SMG1-212ENST00000566328 TMEM202A6NGA9 273 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 A8MU10 97 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 STX16-NPEPL1H3BU86 382 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 STX16O14662 325 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 PER2O15055 1255 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 BCAT2O15382 392 aaPredicted RBP2.12□□□□□ -2.07
SMG1-212ENST00000566328 CTSVO60911 334 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 KRT18P05783 430 aaKnown RBP2.12□□□□□ -2.07
SMG1-212ENST00000566328 CD48P09326 243 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 PLA2G4BP0C869 781 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 DNAH10OSP0CZ25 163 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 AHRP35869 848 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 NR2C2P49116 596 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 NEK3P51956 506 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 PRKAA2P54646 552 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 VEPH1Q14D04 833 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 EIF2S3LQ2VIR3 472 aaKnown RBP2.12□□□□□ -2.07
SMG1-212ENST00000566328 SLC45A4Q5BKX6 768 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 SERTAD4-AS1Q5TG53 156 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 CPLX2Q6PUV4 134 aaKnown RBP2.12□□□□□ -2.07
SMG1-212ENST00000566328 PLEKHM3Q6ZWE6 761 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 ERC1Q8IUD2 1116 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 TMEM57Q8N5G2 664 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 PPHLN1Q8NEY8 458 aaKnown RBP2.12□□□□□ -2.07
SMG1-212ENST00000566328 OR2AK2Q8NG84 335 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 OR52I2Q8NH67 350 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 THAP4Q8WY91 577 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 CCDC136Q96JN2 1154 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 MPHOSPH8Q99549 860 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.12□□□□□ -2.07
SMG1-212ENST00000566328 NDST4Q9H3R1 872 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 BPIFA1Q9NP55 256 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 GPR108Q9NPR9 543 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 ALKBH4Q9NXW9 302 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 CACNG5Q9UF02 275 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 PTPRCP08575 1304 aa2.12□□□□□ -2.07
SMG1-212ENST00000566328 A0A087X002 238 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 PABPN1LA6NDY0 278 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 CAND2O75155 1236 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 MT-CYBP00156 380 aaPredicted RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 EGFP01133 1207 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 CYC1P08574 325 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 CSF2RAP15509 400 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 TYMPP19971 482 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 CCR10P46092 362 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 MLLT10P55197 1068 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 RUNX1T1Q06455 604 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 FOXM1Q08050 763 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 FOXD4Q12950 439 aaPredicted RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 NAA25Q14CX7 972 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 TAF11Q15544 211 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 ZC2HC1CQ53FD0 456 aaPredicted RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 SGO1Q5FBB7 561 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 FAM83BQ5T0W9 1011 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 LRRC8EQ6NSJ5 796 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 SLC46A3Q7Z3Q1 461 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 GPAT4Q86UL3 456 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 NOXA1Q86UR1 476 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 SPATA6LQ8N4H0 392 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 FCAMRQ8WWV6 532 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 AGAP3Q96P47 875 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 BBS4Q96RK4 519 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 IWS1Q96ST2 819 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 ELAC2Q9BQ52 826 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 CLSTN3Q9BQT9 956 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 SYT11Q9BT88 431 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 NUF2Q9BZD4 464 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 WDR12Q9GZL7 423 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 KCNN2Q9H2S1 579 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 RAD21L1Q9H4I0 556 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 STN1Q9H668 368 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 PPP1R3EQ9H7J1 279 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 DDX4Q9NQI0 724 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 PRR34Q9NV39 138 aa2.11□□□□□ -2.07
SMG1-212ENST00000566328 SRP68Q9UHB9 627 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 EXOGQ9Y2C4 368 aaKnown RBP2.11□□□□□ -2.07
SMG1-212ENST00000566328 ZCWPW2A0A1B0GU75 182 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 A6NL46 340 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 PRR32B1ATL7 298 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 NCAM2O15394 837 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 CSTBP04080 98 aaKnown RBP2.1□□□□□ -2.07
SMG1-212ENST00000566328 TK1P04183 234 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 MYL1P05976 194 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 PRG2P13727 222 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 POU1F1P28069 291 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 MAP2K2P36507 400 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 FASLGP48023 281 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 BMXP51813 675 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 ACTR2P61160 394 aa2.1□□□□□ -2.07
SMG1-212ENST00000566328 CSNK2A1P68400 391 aaPredicted RBP2.1□□□□□ -2.07
SMG1-212ENST00000566328 KCNJ10P78508 379 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms