RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CRCPO75575 148 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LDLRP01130 860 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CSRP3P50461 194 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TMTC4Q5T4D3 741 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MIER2Q8N344 545 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 OR10Q1Q8NGQ4 319 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MPP6Q9NZW5 540 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TTC3P53804 2025 aa20.47■□□□□ 0.87
MAP1LC3B-206ENST00000564844 LCTP09848 1927 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 SULT1C4O75897 302 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AGXTP21549 392 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 JAK1P23458 1154 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NFKBIAP25963 317 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AXLP30530 894 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HOXA11P31270 313 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 UNC50Q53HI1 259 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 HECTD2Q5U5R9 776 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 KIAA0319Q5VV43 1072 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 DSG4Q86SJ6 1040 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CHPT1Q8WUD6 406 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ACOX2Q99424 681 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CPA4Q9UI42 421 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 RLFQ13129 1914 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 OXSR1O95747 527 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PRKACGP22612 351 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 NKX2-5P52952 324 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PLA2G16P53816 162 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 AQP6Q13520 282 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 UNC93AQ86WB7 457 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ABHD11Q8NFV4 315 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 MARCH4Q9P2E8 410 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 ANAPC2Q9UJX6 822 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 PTBP2Q9UKA9 531 aaKnown RBP20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 TRHDEQ9UKU6 1024 aa20.46■□□□□ 0.87
MAP1LC3B-206ENST00000564844 CDK14O94921 469 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RFC2P35250 354 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 IL1RL1Q01638 556 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GALNT2Q10471 571 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CRTC3Q6UUV7 619 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PSD4Q8NDX1 1056 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PPM1MQ96MI6 270 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TUBB1Q9H4B7 451 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RAD21L1Q9H4I0 556 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SNAP91O60641 907 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CLPXO76031 633 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PRSS56P0CW18 603 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PRDX3P30048 256 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 OR4D2P58180 307 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ATP6V0D1P61421 351 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 UFM1P61960 85 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CRYBG2Q8N1P7 616 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ATPAF2Q8N5M1 289 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 BIRC7Q96CA5 298 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HNRNPABQ99729 332 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TRIM15Q9C019 465 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PRDM8Q9NQV8 689 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NSMCE4AQ9NXX6 385 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ACTR3BQ9P1U1 418 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FBXW11Q9UKB1 542 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SMIM28A0A1B0GU29 152 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HLA-DQB2P05538 268 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ARSDP51689 593 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZNF678Q5SXM1 525 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CCNYL2Q5T2Q4 361 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZNF772Q68DY9 489 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 Q8N9G6 341 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZFP42Q96MM3 310 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 KLHL5Q96PQ7 755 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PIM2Q9P1W9 311 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 UTS2RQ9UKP6 389 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 U3KQV3 271 aa20.45■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MYBPHLA2RUH7 354 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CYP2C9P11712 490 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ADCYAP1R1P41586 468 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MTPNP58546 118 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CLCQ05315 142 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CCDC92Q53HC0 331 aaPredicted RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NIPAL1Q6NVV3 410 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ANKRD13AQ8IZ07 590 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CADM3Q8N126 398 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 OR13F1Q8NGS4 319 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZNF420Q8TAQ5 688 aaPredicted RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SNX27Q96L92 541 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MIR1-1HGQ9H1L0 117 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ADAMTS10Q9H324 1103 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 A0A087X1B8 175 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 MSI1O43347 362 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GJB3O75712 270 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 INMTO95050 263 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CACNB2Q08289 660 aaPredicted RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 DGCR6Q14129 220 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PAGE2BQ5JRK9 111 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 LINC00523Q86TU6 105 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 C2CD4AQ8NCU7 369 aaPredicted RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RIC8BQ9NVN3 520 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PIN4Q9Y237 131 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 VWA7Q9Y334 891 aa20.44■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RBM47A0AV96 593 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AQP12BA6NM10 295 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms