RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CDH22Q9UJ99 828 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 AJAP1Q9UKB5 411 aaPredicted RBP5.64□□□□□ -1.51
CHD9-210ENST00000564582 CCPG1Q9ULG6 757 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 GRID1Q9ULK0 1009 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 ERGIC3Q9Y282 383 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 WBP11Q9Y2W2 641 aaKnown RBP5.64□□□□□ -1.51
CHD9-210ENST00000564582 PCDHGA9Q9Y5G4 932 aaKnown RBP5.64□□□□□ -1.51
CHD9-210ENST00000564582 PCDHGA8Q9Y5G5 932 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 PCDHGA7Q9Y5G6 932 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 PCDHGA6Q9Y5G7 932 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 PCDHGA3Q9Y5H0 932 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 SPATA31A6Q5VVP1 1343 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 SPATA31A3Q5VYP0 1347 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 ZNF335Q9H4Z2 1342 aaPredicted RBP5.64□□□□□ -1.51
CHD9-210ENST00000564582 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
CHD9-210ENST00000564582 UBR1Q8IWV7 1749 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 DLEC1Q9Y238 1755 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ARHGEF37A1IGU5 675 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 SAGE2PA6NJ88 616 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 SDR42E2A6NKP2 422 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 EIF4E1BA6NMX2 242 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 FAM25AB3EWG3 89 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 FAM25CB3EWG5 89 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 FAM25GB3EWG6 89 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 KLRF2D3W0D1 207 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 F5H6K3 240 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 H3BNH8 94 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 TRIM24O15164 1050 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 TOM1O60784 492 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GPR32O75388 356 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GMNNO75496 209 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GCATO75600 419 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 SULT1C4O75897 302 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 PGM3O95394 542 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 PEX11BO96011 259 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 AMHP03971 560 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ENO1P06733 434 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 RALBP11234 206 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 FCGR1AP12314 374 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ETS2P15036 469 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 KCNA2P16389 499 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 DNAJB1P25685 340 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 KLRC2P26717 231 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 RPA1P27694 616 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 DCKP27707 260 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 TKTP29401 623 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 PIK3CAP42336 1068 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GPD2P43304 727 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 AQP4P55087 323 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 MYL7Q01449 175 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ILF2Q12905 390 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 DLG1Q12959 904 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GRM1Q13255 1194 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 MSLNQ13421 630 aaPredicted RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 NR1D2Q14995 579 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 SLC1A5Q15758 541 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 PKN2Q16513 984 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 AASDHQ4L235 1098 aaPredicted RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 ZC2HC1CQ53FD0 456 aaPredicted RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 SFT2D3Q587I9 215 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 RBM20Q5T481 1227 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 AGAP7PQ5VUJ5 663 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 C1QL3Q5VWW1 255 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ACAD10Q6JQN1 1059 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ZNF280DQ6N043 979 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CLEC4GQ6UXB4 293 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 TIFABQ6ZNK6 161 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 USP51Q70EK9 711 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GPRIN1Q7Z2K8 1008 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GPR180Q86V85 440 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 HEATR4Q86WZ0 1026 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CAMK1DQ8IU85 385 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 TICAM1Q8IUC6 712 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 LACC1Q8IV20 430 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 NUDCD3Q8IVD9 361 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CTAGE3PQ8IX95 158 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ANKRD13AQ8IZ07 590 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CENPSQ8N2Z9 138 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 MIER2Q8N344 545 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 MIGA1Q8NAN2 632 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 OR7G1Q8NGA0 311 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 GSDMBQ8TAX9 411 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 PSPC1Q8WXF1 523 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 RMDN1Q96DB5 314 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ZNF503Q96F45 646 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CNDP1Q96KN2 507 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ZNF597Q96LX8 424 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 DCLRE1CQ96SD1 692 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 NEURL2Q9BR09 285 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ZNF747Q9BV97 191 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 NUP85Q9BW27 656 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 ANKRD60Q9BZ19 345 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 CPEB1Q9BZB8 566 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 TRIM15Q9C019 465 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 NDEL1Q9GZM8 345 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 INTS2Q9H0H0 1204 aaKnown RBP5.63□□□□□ -1.51
CHD9-210ENST00000564582 TPK1Q9H3S4 243 aa5.63□□□□□ -1.51
CHD9-210ENST00000564582 PDZD7Q9H5P4 517 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms