RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SLC30A9Q6PML9 568 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 LUZP1Q86V48 1076 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 PATE1Q8WXA2 126 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 MAML1Q92585 1016 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 SCARF2Q96GP6 870 aaPredicted RBP23.8■■□□□ 1.4
NME3-206ENST00000564252 CMKLR1Q99788 373 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 POLR1EQ9GZS1 481 aaKnown RBP23.8■■□□□ 1.4
NME3-206ENST00000564252 ABCG8Q9H221 673 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 RDH14Q9HBH5 336 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 CD84Q9UIB8 345 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 CAPN11Q9UMQ6 739 aa23.8■■□□□ 1.4
NME3-206ENST00000564252 ASH1LQ9NR48 2969 aaKnown RBP23.79■■□□□ 1.4
NME3-206ENST00000564252 A0A0J9YYE9 177 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 RHPN2P1A8MT19 583 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 TRBC1P01850 177 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 LIPCP11150 499 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 GPR1P46091 355 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 PTSQ03393 145 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 ITKQ08881 620 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 SRSF6Q13247 344 aaKnown RBP23.79■■□□□ 1.4
NME3-206ENST00000564252 C16orf72Q14CZ0 275 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 PAFAH1B3Q15102 231 aaKnown RBP23.79■■□□□ 1.4
NME3-206ENST00000564252 AMZ1Q400G9 498 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 ATP13A4Q4VNC1 1196 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 DOK6Q6PKX4 331 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 ADAMTSL4Q6UY14 1074 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 PIM3Q86V86 326 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 CPNE8Q86YQ8 564 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 NAGSQ8N159 534 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 CPLX3Q8WVH0 158 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 AP2M1Q96CW1 435 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 WDR70Q9NW82 654 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 FOXJ2Q9P0K8 574 aa23.79■■□□□ 1.4
NME3-206ENST00000564252 KRT10P13645 584 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 ALDH4A1P30038 563 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 SSR1P43307 286 aaKnown RBP23.78■■□□□ 1.4
NME3-206ENST00000564252 UBASH3AP57075 661 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 NFKBIBQ15653 356 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 HADHQ16836 314 aaKnown RBP23.78■■□□□ 1.4
NME3-206ENST00000564252 CCDC122Q5T0U0 273 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 ZNF574Q6ZN55 896 aaPredicted RBP23.78■■□□□ 1.4
NME3-206ENST00000564252 NDUFAF2Q8N183 169 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 USP7Q93009 1102 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 SCAMP4Q969E2 229 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 NUDT22Q9BRQ3 303 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 NENFQ9UMX5 172 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 PLEKHM1Q9Y4G2 1056 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 FLNBO75369 2602 aaKnown RBP23.78■■□□□ 1.4
NME3-206ENST00000564252 BOD1L1Q8NFC6 3051 aa23.78■■□□□ 1.4
NME3-206ENST00000564252 C9orf172C9J069 976 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 MATN3O15232 486 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 MAP3K6O95382 1288 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 ZNF30P17039 623 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 CD1CP29017 333 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 GPR3P46089 330 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 MAPK10P53779 464 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 TPM4P67936 248 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 DSC2Q02487 901 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 CLPPQ16740 277 aaPredicted RBP23.77■■□□□ 1.4
NME3-206ENST00000564252 ANKRD20A8PQ5CZ79 823 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 USP53Q70EK8 1073 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 ZNF765Q7L2R6 523 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 NLRP8Q86W28 1048 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 ZNF564Q8TBZ8 553 aaPredicted RBP23.77■■□□□ 1.4
NME3-206ENST00000564252 FATE1Q969F0 183 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 IQCDQ96DY2 449 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 MED8Q96G25 268 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 CDH19Q9H159 772 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 TMEM98Q9Y2Y6 226 aa23.77■■□□□ 1.4
NME3-206ENST00000564252 BSNQ9UPA5 3926 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 SYCE3A1L190 88 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 PPM1DO15297 605 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 GYPCP04921 128 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 GJC1P36383 396 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 STC1P52823 247 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 PEX6Q13608 980 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 IFI16Q16666 785 aaKnown RBP23.76■■□□□ 1.39
NME3-206ENST00000564252 TIGD7Q6NT04 549 aaPredicted RBP23.76■■□□□ 1.39
NME3-206ENST00000564252 TRIM74Q86UV6 250 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 ZFAND4Q86XD8 727 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.76■■□□□ 1.39
NME3-206ENST00000564252 TSGA13Q96PP4 275 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 OR2M4Q96R27 311 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 AGAP2Q99490 1192 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 ZNF670Q9BS34 389 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 TDRD1Q9BXT4 1180 aaKnown RBP23.76■■□□□ 1.39
NME3-206ENST00000564252 AMACRQ9UHK6 382 aa23.76■■□□□ 1.39
NME3-206ENST00000564252 LUC7L2Q9Y383 392 aaKnown RBP23.76■■□□□ 1.39
NME3-206ENST00000564252 IGHV5-10-1A0A0J9YXX1 117 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 ZW10O43264 779 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 PRLP01236 227 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 CES1P23141 567 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 CCNCP24863 283 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 ACTR1BP42025 376 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 EPHB1P54762 984 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 ACTR1AP61163 376 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 PYCR3Q53H96 274 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 DTX1Q86Y01 620 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 ARRDC2Q8TBH0 407 aa23.75■■□□□ 1.39
NME3-206ENST00000564252 FAF2Q96CS3 445 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms