RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 NRSN1Q8IZ57 195 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 SDR16C5Q8N3Y7 309 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 PDCD7Q8N8D1 485 aaKnown RBP30.64■■■□□ 2.5
CMTM4-204ENST00000563952 MDM1Q8TC05 714 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 MAPK15Q8TD08 544 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 CCHCR1Q8TD31 782 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 HTR3CQ8WXA8 447 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 ALG3Q92685 438 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 TADA1Q96BN2 335 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 OSBPL8Q9BZF1 889 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 TMEM168Q9H0V1 697 aa30.64■■■□□ 2.5
CMTM4-204ENST00000563952 CCDC86Q9H6F5 360 aaKnown RBP30.64■■■□□ 2.5
CMTM4-204ENST00000563952 CARS2Q9HA77 564 aaKnown RBP30.64■■■□□ 2.5
CMTM4-204ENST00000563952 IGF2RP11717 2491 aa30.64■■■□□ 2.49
CMTM4-204ENST00000563952 HACD1B0YJ81 288 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 F5H423 210 aaPredicted RBP30.63■■■□□ 2.49
CMTM4-204ENST00000563952 H7C0C1 242 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 MT-CO3P00414 261 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 SOD1P00441 154 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 CEACAM5P06731 702 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 PIRTP0C851 137 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 NFKB1P19838 968 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 CD68P34810 354 aaPredicted RBP30.63■■■□□ 2.49
CMTM4-204ENST00000563952 CETN2P41208 172 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 ATP5OP48047 213 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 SLC14A2Q15849 920 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 AADACL2Q6P093 401 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 ADAMTSL4Q6UY14 1074 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 LYSMD3Q7Z3D4 306 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 ARL10Q8N8L6 244 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 KYQ8NBH2 561 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 AGAP2Q99490 1192 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 FRMD8Q9BZ67 464 aaPredicted RBP30.63■■■□□ 2.49
CMTM4-204ENST00000563952 C10orf88Q9H8K7 445 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 PADI4Q9UM07 663 aa30.63■■■□□ 2.49
CMTM4-204ENST00000563952 EME2A4GXA9 379 aaPredicted RBP30.62■■■□□ 2.49
CMTM4-204ENST00000563952 POLD2P49005 469 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 GSDMDP57764 484 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 NOMO1Q15155 1222 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 CCDC70Q6NSX1 233 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 PID1Q7Z2X4 250 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 TRIM74Q86UV6 250 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 SYCE1Q8N0S2 351 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 ZNF567Q8N184 647 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 CCL4L1Q8NHW4 92 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 PKD2L2Q9NZM6 624 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 PACSIN2Q9UNF0 486 aaPredicted RBP30.62■■■□□ 2.49
CMTM4-204ENST00000563952 EFR3BQ9Y2G0 817 aa30.62■■■□□ 2.49
CMTM4-204ENST00000563952 FTCDO95954 541 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 SLC4A1P02730 911 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 PYGMP11217 842 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 PTPN7P35236 360 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 GNPDA1P46926 289 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 SPINT3P49223 89 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 OTUD4Q01804 1114 aaKnown RBP30.61■■■□□ 2.49
CMTM4-204ENST00000563952 XRCC4Q13426 336 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 PERM1Q5SV97 790 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 ACTL9Q8TC94 416 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 PTCD2Q8WV60 388 aaKnown RBP30.61■■■□□ 2.49
CMTM4-204ENST00000563952 NAT6Q93015 286 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 VAT1Q99536 393 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 SUFUQ9UMX1 484 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 SHOC2Q9UQ13 582 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 TMEM98Q9Y2Y6 226 aa30.61■■■□□ 2.49
CMTM4-204ENST00000563952 USP24Q9UPU5 2620 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 INPP4BO15327 924 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 NDST3O95803 873 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 FUCA1P04066 466 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 CAPNS1P04632 268 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 PYGLP06737 847 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 RBL1P28749 1068 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 NLRP8Q86W28 1048 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 UBL4BQ8N7F7 174 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 DCBLD1Q8N8Z6 715 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 FAM46DQ8NEK8 389 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 HIC2Q96JB3 615 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 FAM118BQ9BPY3 351 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 FAM83DQ9H4H8 585 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 ZFYVE1Q9HBF4 777 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 FAM153AQ9UHL3 310 aa30.6■■■□□ 2.49
CMTM4-204ENST00000563952 CYP4F3Q08477 520 aa30.59■■■□□ 2.49
CMTM4-204ENST00000563952 RAVER1Q8IY67 606 aaKnown RBP30.59■■■□□ 2.49
CMTM4-204ENST00000563952 MAGEE1Q9HCI5 957 aa30.59■■■□□ 2.49
CMTM4-204ENST00000563952 RSPH14Q9UHP6 348 aa30.59■■■□□ 2.49
CMTM4-204ENST00000563952 SLC17A4Q9Y2C5 497 aa30.59■■■□□ 2.49
CMTM4-204ENST00000563952 ZNF711Q9Y462 761 aa30.59■■■□□ 2.49
CMTM4-204ENST00000563952 TJP3O95049 919 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 PTMAP06454 111 aaKnown RBP30.58■■■□□ 2.49
CMTM4-204ENST00000563952 WNT3AP56704 352 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 EIF3EP60228 445 aaKnown RBP30.58■■■□□ 2.49
CMTM4-204ENST00000563952 CDCP2Q5VXM1 449 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 WDR24Q96S15 920 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 GPR63Q9BZJ6 419 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 TRHDEQ9UKU6 1024 aa30.58■■■□□ 2.49
CMTM4-204ENST00000563952 ASPMQ8IZT6 3477 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 MIF4GDA9UHW6 222 aaKnown RBP30.57■■■□□ 2.48
CMTM4-204ENST00000563952 B4DGG1 531 aa30.57■■■□□ 2.48
CMTM4-204ENST00000563952 TNNT3P45378 269 aaPredicted RBP30.57■■■□□ 2.48
CMTM4-204ENST00000563952 ILF3Q12906 894 aaKnown RBP eCLIP30.57■■■□□ 2.484e-7■□□□□ 9.9
CMTM4-204ENST00000563952 KDELC1Q6UW63 502 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms